Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2366 ATGAGTGTACTGGGCATGCAGAGCCTCCTGATCCTGATATTCTTGAAATTGATCCAACTTGTCGATACATTAGGTTATAAGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGGTTCGGATTGATGAGGTGCTACAGTCACCAGGTGACTTGGAAAGGCTCTACTCAGAAGTGCATCTCTTAAAATCATTGAAGAACAATAACATAGTAAAATTCTACAATTCCTGGATTGATAATAAGAACAAGACTGTTAACATCATCACGGAGTTGTTCTCTTCGGGTAGCCTCAGACAGTATCGTAGGAAGCACAAGAAGGTTGACATGAAGGCTCTTAAAGGATGGGCAAGACAGATATTAATGGGTTTAAACTACCTCCATGGTCACAACCCACCTATTATACACAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATCTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTGATTGGAACCCCTGAATTTATGGCACCCGAGCTGTATGATGAAAATTACAATGAATTGGCCGACATATATTCATTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCGTATAGTGAATGCAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCTGGTATAAAACCCGCTTCCCTTTCTAAAGTCAAAGATCCAGAAATGAAATTATTTATTGAGAAATGTCTAGTCCCAGCATCTCAAAGAATGTCAGCAAAGGAGCTTTTGATAGATCCTTTTCTTCAAATGAATAGTGTGGCAAGAAATCGTCATCTATCCTTACCAGATATTGTCATCCCTAAATGTGGAGCCTTTGGAGATCGTATCCTCGTGTCAGAAGGTCCTGCTACTCAACATAACGGATCAAATTCCTTGGATCTTGATGATACTTGTGAATTACCTATGATCACTACATACGATGGTTCTGGTAACGCTTCACGTTGTCAATGTGTTGAGGTACAAAAGTTGAAGAGAGGTGATATTTTCAATCTAAAAGGTGAAGAAAATGATGAGAATTCTGTGTCGATAGTTCTTCGGATAGCTGATCAAGGAGGGCGAGTAAGAAATATCCATTTCTTATTTTACCTAGATAGTGATACTGCTATTTCAGTTTCAAGTGAAATGGTTGAGCAACTCGAACTTCCAGATCAAAATATAAAATTCATAGCTGAGTTGATAGATTTGTTATTGATTAATTTGGTTCCAAAGTGGAAACCTTGTGTAGATATTGCTCATTTGGTTTCACGAAGTTGTAGAAAAACTATTATTGGACAAAAAGATCTGGAGCTAGCAAAACAGAAGCAGCACTCAGAAGATTCTATACAAAATATTACTGAAGAGAAAGGTATCTCATGCTCGAGTCGCAGTTCTCTTGCATCAGAAAAACATTATCACTCCAACTTGAATGAAATTTCATCCTATGGCAATATTGATCACGGAAATACAATCAAAATAGATGATTTGTGTTCTGAGACTAATGATAAGAAGTTATCTTTAGTTTCGTTCTTGTCTGTGGACTCAGCATTTAATGATTTCAACTTGCCAAGAGTACCAGGAGAGACTGAATGCTCTTTTGTATCTGTAATGGAAGCATGGCCAAATTATCATAGGTGTAAGATATCAGAATTAGGAAGTCATGATATGTTAAGCTTCCCAGCCCATTCTAGTAATGTTTCTTCTTTATCTAACGTAGAAGATGAGTTGAAAATAGAGTTAGAAGTGATTGAACAAAAATATCTAGAGACAATTAAAGAAGCATCAAAAGTAAGATCTCAAGCTATCATGGAGGTTAGAGGAAGGTTACCCCAGAAGAAGATCCAATCATAA 1887 0.3768 MSVLGMQSLLILIFLKLIQLVDTLGYKAFDEVSGLEVAWNQVRIDEVLQSPGDLERLYSEVHLLKSLKNNNIVKFYNSWIDNKNKTVNIITELFSSGSLRQYRRKHKKVDMKALKGWARQILMGLNYLHGHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIEKCLVPASQRMSAKELLIDPFLQMNSVARNRHLSLPDIVIPKCGAFGDRILVSEGPATQHNGSNSLDLDDTCELPMITTYDGSGNASRCQCVEVQKLKRGDIFNLKGEENDENSVSIVLRIADQGGRVRNIHFLFYLDSDTAISVSSEMVEQLELPDQNIKFIAELIDLLLINLVPKWKPCVDIAHLVSRSCRKTIIGQKDLELAKQKQHSEDSIQNITEEKGISCSSRSSLASEKHYHSNLNEISSYGNIDHGNTIKIDDLCSETNDKKLSLVSFLSVDSAFNDFNLPRVPGETECSFVSVMEAWPNYHRCKISELGSHDMLSFPAHSSNVSSLSNVEDELKIELEVIEQKYLETIKEASKVRSQAIMEVRGRLPQKKIQS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2366 628 Gene3D Transferase(Phosphotransferase) domain 1 94 276 - -
Prci4g2366 628 SMART serkin_6 18 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2366 628 CDD STKc_WNK 26 268 - -
Prci4g2366 628 FunFam Probable serine/threonine-protein kinase WNK1 20 92 - -
Prci4g2366 628 Pfam Protein kinase domain 26 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2366 628 SUPERFAMILY Protein kinase-like (PK-like) 26 304 IPR011009 -
Prci4g2366 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Prci4g2366 628 Coils Coil 578 605 - -
Prci4g2366 628 ProSiteProfiles Protein kinase domain profile. 18 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2366 628 FunFam probable serine/threonine-protein kinase WNK9 94 273 - -
Prci4g2366 628 Gene3D Phosphorylase Kinase; domain 1 21 92 - -
Prci4g2366 628 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 26 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2366 Prci-Chr4 36467313 36471085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2366 111 463 MAP Kinase Kinase Kinase AT1G49160 65.439 6.80e-166 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci4g2366 Pkinase 6.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2366 K08867 - gmx:121175054 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2366 4 36467313 36471085 Prci4g2366 4 36467313 36471085 ECH