Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2365 ATGTGTAGGATTAGGTCTAGCAAGGCAAAGATGAGTGTGGCGAGGGCAGGAAGCTCAGATGAGTGTACTGGGCATGCAGAGCCTCCTGATCCTGATATTCTTGAAATTGATCCAACTTGTCGATACATTAGGTATAAAGATGTGATCGGCAAAGGTGCTTTCAAGACATGTTATAAGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGGTTCGGATTGATGAGGTGCTACAGTCACCAGGTGACTTGGAAAGGCTCTACTCAGAAGTGCATCTCTTAAAATCATTGAAGAACAATAACATAGTAAAATTCTACAATTCCTGGATTGATAATAAGAACAAGACTGTTAACATCATCACGGAGTTGTTCTCTTCGGGTAGCCTCAGACAGAAGCACAAGAAGGTTGACATGAAGGCTCTTAAAGGATGGGCAAGACAGATATTAATGGGTTTAAACTACCTCCATGGTCACAACCCACCTATTATACACAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATCTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTGATTGGAACCCCTGAATTTATGGCACCCGAGCTGTATGATGAAAATTACAATGAATTGGCCGACATATATTCATTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCGTATAGTGAATGCAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCTGGTATAAAACCCGCTTCCCTTTCTAAAGTCAAAGATCCAGAAATGAAATTATTTATTGAGAAATGTCTAGTCCCAGCATCTCAAAGAATGTCAGCAAAGGAGCTTTTGATAGATCCTTTTCTTCAAATGAATAGTGTGGCAAGAAATCGTCATCTATCCTTACCAGATATTGTCATCCCTAAATGTGGAGCCTTTGGAGATCGTATCCTCGTGTCAGAAGGTCCTGCTACTCAACATAACGGATCAAATTCCTTGGATCTTGATGATACTTGTGAATTACCTATGATCACTACATACGATGGTTCTGGTAACGCTTCACGTTGTCAATGTGTTGAGGTACAAAAGTTGAAGAGAGGTGATATTTTCAATCTAAAAGGTGAAGAAAATGATGAGAATTCTGTGTCGATAGTTCTTCGGATAGCTGATCAAGGAGGGCGAGTAAGAAATATCCATTTCTTATTTTACCTAGATAGTGATACTGCTATTTCAGTTTCAAGTGAAATGGTTGAGCAACTCGAACTTCCAGATCAAAATATAAAATTCATAGCTGAGTTGATAGATTTGTTATTGATTAATTTGGTTCCAAAGTGGAAACCTTGTGTAGATATTGCTCATTTGGTTTCACGAAGTTGTAGAAAAACTATTATTGGACAAAAAGATCTGGAGCTAGCAAAACAGAAGCAGCACTCAGAAGATTCTATACAAAATATTACTGAAGAGAAAGGTATCTCATGCTCGAGTCGCAGTTCTCTTGCATCAGAAAAACATTATCACTCCAACTTGAATGAAATTTCATCCTATGGCAATATTGATCACGGAAATACAATCAAAATAGATGATTTGTGTTCTGAGACTAATGATAAGAAGTTATCTTTAGTTTCGTTCTTGTCTGTGGACTCAGCATTTAATGATTTCAACTTGCCAAGAGTACCAGGAGAGACTGAATGCTCTTTTGTATCTGTAATGGAAGCATGGCCAAATTATCATAGGTGTAAGATATCAGAATTAGGAAGTCATGATATGTTAAGCTTCCCAGCCCATTCTAGTAATGTTTCTTCTTTATCTAACGTAGAAGATGAGTTGAAAATAGAGTTAGAAGTGATTGAACAAAAATATCTAGAGACAATTAAAGAAGCATCAAAAGTAAGATCTCAAGCTATCATGGAGGTTAGAGGAAGGTTACCCCAGAAGAAGATCCAATCATAA 1974 0.381 MCRIRSSKAKMSVARAGSSDECTGHAEPPDPDILEIDPTCRYIRYKDVIGKGAFKTCYKAFDEVSGLEVAWNQVRIDEVLQSPGDLERLYSEVHLLKSLKNNNIVKFYNSWIDNKNKTVNIITELFSSGSLRQKHKKVDMKALKGWARQILMGLNYLHGHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIEKCLVPASQRMSAKELLIDPFLQMNSVARNRHLSLPDIVIPKCGAFGDRILVSEGPATQHNGSNSLDLDDTCELPMITTYDGSGNASRCQCVEVQKLKRGDIFNLKGEENDENSVSIVLRIADQGGRVRNIHFLFYLDSDTAISVSSEMVEQLELPDQNIKFIAELIDLLLINLVPKWKPCVDIAHLVSRSCRKTIIGQKDLELAKQKQHSEDSIQNITEEKGISCSSRSSLASEKHYHSNLNEISSYGNIDHGNTIKIDDLCSETNDKKLSLVSFLSVDSAFNDFNLPRVPGETECSFVSVMEAWPNYHRCKISELGSHDMLSFPAHSSNVSSLSNVEDELKIELEVIEQKYLETIKEASKVRSQAIMEVRGRLPQKKIQS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2365 657 FunFam Probable serine/threonine-protein kinase WNK1 28 124 - -
Prci4g2365 657 Gene3D Transferase(Phosphotransferase) domain 1 127 305 - -
Prci4g2365 657 SMART serkin_6 43 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2365 657 SUPERFAMILY Protein kinase-like (PK-like) 45 333 IPR011009 -
Prci4g2365 657 ProSiteProfiles Protein kinase domain profile. 43 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2365 657 Coils Coil 607 634 - -
Prci4g2365 657 CDD STKc_WNK 41 297 - -
Prci4g2365 657 Gene3D Phosphorylase Kinase; domain 1 28 124 - -
Prci4g2365 657 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 28 514 - -
Prci4g2365 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Prci4g2365 657 Pfam Protein kinase domain 46 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2365 657 MobiDBLite consensus disorder prediction 1 30 - -
Prci4g2365 657 FunFam probable serine/threonine-protein kinase WNK9 126 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2365 Prci-Chr4 36467313 36471085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2365 140 492 MAP Kinase Kinase Kinase AT1G49160 65.439 3.15e-165 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci4g2365 Pkinase 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2365 K08867 - gmx:121175054 765.377