Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2364 ATGTCTGGTATTTCTGATCATCAGTTCTTTTTCGCCGATGGAATGTTAATCCACTCCAGAAGGTTACTCTTCCTTCACTCCCACCTTAATTCTTCCAAAACCAACTCGACAGATCCTTCCTTCCTCGGAGATGGTAACTTCGATGCAAATGTTATCATGGTACTGTCTGTCCTCTTGTGTGCTCTCATCTGCTCGCTGGGTTTGAACTCCATCATCAGATGTGCCCTAAGGTTTTCCAACATCGTCGTTAACGACCCCGCCGCAGCCGCCGCCGCCACTAACTCGCCGGCTCGACTGGCCAACACTGGAGTGAAGAAGAAGGCCTTGAAGACGTTCCCGACAGTGACGTACTCTATTGAGTTGAAGCTCCCAGGTCCGGACACAGAGTGCGCGATCTGTCTCTCGGAGTTCAACAGTGGCGATCGGCTTCGGATTCTTCCCAAGTGCAACCATGGCTACCACCTTCGTTGCATTGACAAGTGGCTCGGCTCGCACTCGTCTTGCCCTAAGTGCAGACGCTGTCTCCTTCAGACATGTCATAAGATCGTAGATTCATCCACAACGTCCCAACCTTCTTCTGCTGAAACTATTGTGAGGATCTCACCTTTAGAACCAGAAGCTATGGTGCGTAACTATACCTAG 642 0.5031 MSGISDHQFFFADGMLIHSRRLLFLHSHLNSSKTNSTDPSFLGDGNFDANVIMVLSVLLCALICSLGLNSIIRCALRFSNIVVNDPAAAAAATNSPARLANTGVKKKALKTFPTVTYSIELKLPGPDTECAICLSEFNSGDRLRILPKCNHGYHLRCIDKWLGSHSSCPKCRRCLLQTCHKIVDSSTTSQPSSAETIVRISPLEPEAMVRNYT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2364 213 Pfam Ring finger domain 129 172 IPR001841 -
Prci4g2364 213 CDD RING-H2_EL5-like 129 172 - -
Prci4g2364 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 176 IPR013083 -
Prci4g2364 213 SMART ring_2 130 171 IPR001841 -
Prci4g2364 213 SUPERFAMILY RING/U-box 123 177 - -
Prci4g2364 213 FunFam RING-H2 finger protein ATL73 91 177 - -
Prci4g2364 213 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Prci4g2364 213 PANTHER RING-H2 FINGER PROTEIN ATL78 18 208 IPR044602 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2364 Prci-Chr4 36436826 36437727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2364 23 176 C3H Transcription Factor Family AT3G10910 45.062 2.49e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2364 K19040 - gmx:100807227 259.225