Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2354 ATGCCAGAGAATTCGATTTTCCCTGAACACTCCATTCAATACCGGAGCCGCACGGAGGAGGATGGTGGTGAGCCTGTCTCTGATGGATGCCAAGACGAGCAGGTAACAGTCTCGGCCGGAGATGTTGACCGGAACATCACCGGTGGTCGGTGGCCTCCAGAGGAGACTAAGGCTTTGCTCAAGATAAGGTCTGATATGGACGCTGCTTTCAGGGATACGTTCCCCAAAGTTCATCTCTGGGAACAAGTTTCCAGGAGACTAGGGGAGCTAGGATATAATAGAAGTGCTAAGAAATGCCAGGAGAAGTTTGAAAACGTGTACAAATACTACAGAAGGACCAAGGAAGGTCGTTATGGCCGACCCAGTGGCAAGACTTACCGATTCTTTGACCTGTTAGAACCCCTTATGAACTCTCCATACCCTGAAAAGTATGAAGAACAAGTGAGAAACACAGAAATAACCACAACCCCAATGGATTTGTCTGATGTTATTATTCAAGGTGCAATTCCACATCCTTACCCTGAAAAGAATGAGGATCAAACGGAAAACATAGCAACAACTACAACCCCTATAGATTTGTCTAATGTTATTCAAGATTTGATTCCACATTCCATTCGATTCTCTGGTGTCCCCTCTGGTTCAACCACTCCCTCTTCGAGCGAAGAATCAGAGGAAAATATTCGGAAGAAGAGGAAACTGACCCAATATTTTGAAAGGTTGATGAACAAAGTACTAGAGAAGCAAACGAAGCTTCAGAAAAACTTTATGGAGATTTTGCTCAAATGTGAACAAGATAGAATGGCAAGAGAGGAAGCATGGAAGACGCAAGAATTAGCTAGGATTAAGAGGGAGCGAGAGCTTTTGGCTGAAGAAAGATCAATTGCTGCGGCAAAAGATGCTGCAGTGCTTGCCCTTCTGAGGAAGTTCGCAGGACATACAGGATCCACAGAATTACCCGAGAACCTACTTCCTGTTGATATAGATAAGGACGAGCAAGAAAATGATAATGCTGGTAGTAGTGCTGTTGAAAAGCAAGACTGTAGAAATGGTGGGAATTTCACACTGACGAGTCCATCTTCCTCACGATGGCCCAAAGATGAAGTGGAAGCATTGATTAGATTGAGGACAAACTTTGATGTGGAGAATGAAGGAAATGGGCTTAAAGGATCTATTCCTATATGGGAGGAGATATCTTGTTCAATGAAAAAACTTGGGTACGATCGGAGTGCCAGGAGATGCAAAGAGAAATGGGAGAATATGAACAAATACTTCAAGAGGATGAAGAAGAAAAACCAGAAAAAGCCTCAGAGTTCTAAAACATGTCCTTATTTTCAACAGCTTGATGCTCTGTATAATAGTGAAAAGCCTAATGAGACGGTGGAGGATTCAGCCAGTTCTGATAAGGATCAACTGAAACCCGAGGAGCTACCGATACATCTTATGGAGGGTCAGTCTCCGTCCTCATCTGACAGAGAAGAAGGATCAGAATGA 1491 0.4366 MPENSIFPEHSIQYRSRTEEDGGEPVSDGCQDEQVTVSAGDVDRNITGGRWPPEETKALLKIRSDMDAAFRDTFPKVHLWEQVSRRLGELGYNRSAKKCQEKFENVYKYYRRTKEGRYGRPSGKTYRFFDLLEPLMNSPYPEKYEEQVRNTEITTTPMDLSDVIIQGAIPHPYPEKNEDQTENIATTTTPIDLSNVIQDLIPHSIRFSGVPSGSTTPSSSEESEENIRKKRKLTQYFERLMNKVLEKQTKLQKNFMEILLKCEQDRMAREEAWKTQELARIKRERELLAEERSIAAAKDAAVLALLRKFAGHTGSTELPENLLPVDIDKDEQENDNAGSSAVEKQDCRNGGNFTLTSPSSSRWPKDEVEALIRLRTNFDVENEGNGLKGSIPIWEEISCSMKKLGYDRSARRCKEKWENMNKYFKRMKKKNQKKPQSSKTCPYFQQLDALYNSEKPNETVEDSASSDKDQLKPEELPIHLMEGQSPSSSDREEGSE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2354 496 ProSiteProfiles Myb-like domain profile. 43 107 IPR001005 -
Prci4g2354 496 Gene3D - 363 426 - -
Prci4g2354 496 Gene3D - 51 112 - -
Prci4g2354 496 ProSiteProfiles Myb-like domain profile. 361 421 IPR001005 -
Prci4g2354 496 PANTHER FI21293P1 25 484 - -
Prci4g2354 496 MobiDBLite consensus disorder prediction 452 496 - -
Prci4g2354 496 MobiDBLite consensus disorder prediction 338 361 - -
Prci4g2354 496 Pfam Myb/SANT-like DNA-binding domain 361 450 IPR044822 -
Prci4g2354 496 Pfam Myb/SANT-like DNA-binding domain 50 133 IPR044822 -
Prci4g2354 496 MobiDBLite consensus disorder prediction 460 476 - -
Prci4g2354 496 SUPERFAMILY Homeodomain-like 361 423 IPR009057 -
Prci4g2354 496 MobiDBLite consensus disorder prediction 482 496 - -
Prci4g2354 496 CDD GT1 361 424 - -
Prci4g2354 496 SMART sant 47 109 IPR001005 -
Prci4g2354 496 SMART sant 359 423 IPR001005 -
Prci4g2354 496 MobiDBLite consensus disorder prediction 1 50 - -
Prci4g2354 496 MobiDBLite consensus disorder prediction 207 228 - -
Prci4g2354 496 FunFam Trihelix transcription factor GT-2 363 426 - -
Prci4g2354 496 FunFam Trihelix transcription factor GT-2 51 112 - -
Prci4g2354 496 CDD GT1 50 114 - -
Prci4g2354 496 MobiDBLite consensus disorder prediction 330 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2354 Prci-Chr4 36349804 36351922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2354 48 452 Trihelix Transcription Factor Family AT1G76890 42.984 5.46e-107 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci4g2354 Myb_DNA-bind_4 3.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2354 - - pcin:129299456 918.687