Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2349 ATGATCAAACTTCTCGTTTCTAAAAATGTCTCTATTATATCATCCTTTTCTTCCTCCTCACAATTAGTTCGTCCTCTTCTTCTGCAAATTTGTCACTTCTCAGCCTCGTCGTATAACCATTCATTCTTGAGACCCCATGATGATGAAACGCGAAATGTACCCATTTCAGTGTGGTGGGAGTTCGATAGTTGTAATTTACCTGTTGATGTCAATGGGTATAGAATCACTCACTGCATAACTGAAGCTCTTAGGACCAAAGGGATAAAAGGGCCGCTTCAAATCAGGGCTTTTGGTGACGTCTTGCGACTCTCAACTGCCAATCAGGAAGCTCTCTCTTCCACTGGGATAAATCTGGTCCACATTCCCAATGGTGGAAAAAATCCTGCTCATGGATCTCTTCTTGTTGAACTTATGCATTGGGTTTCCAAAAATCCTCCACCAGCACATCTGTTTTTAATTACTGATAATAGGGTTTTTGCTGATATGTTACATCGTTTAAGGTTGGATAACTACAACATCTTGCTTGCAACACCAGCAGGGGCTCCTAAAGTTCTCTGCAATGCAGCAACTATAATGTGGCATTGGAATTCATTAATTAGAGGACAAAATCTTGATGGAAAACACTTTAATCACCCTCCTGATGGTTTGGTTGGTTCTTGGTATGGGCACCATAAGGTGCCTCTTGAAGACCCTTACTTGGATGGTGAGCAGTCACTGATTGAGGAGATATCTTCACCTATCTCAGATTCAGTATTATTTAAAATTCCAAAGGAAATTGTGAAACAAGTTCAAGAAGTTTTAAACTCATATCCAAGAGGTATCTCTGTATCAGACCTTCGAGCAGAAATAGCAAAAGCTGGTATTTGCTTGGATAAAGACTACTATGGTCATAAAAAGTTTTCTCGCTTTCTTTTGTCAGTGGCAAATGTACAGCTTCGGCCTGGACCTGATAAAGTACTTTTTGTTTTTCCAATCCCCCAAAAATGGCCTGGACCATTTGATAACAGTTCTGTACCACCAATAGCATCTTTTGAAACTGTTGATGGTGAGGAGTTCAACCAGGTGGCTACTTCAAAGTTAAGTGGTGAGGTGGAAAAGGTGGTTGAGGATGCAGATGTGAAACCATCAGCAGTATCTGTTGATGGTGAGGAGTTGAAGCAGGTGGCTGCTGCAAAGTTAAGTGGTGGGGTGGCAAAGGTGGTTGGGGATTCATATGTGAAACCATCAATGGCTTCATCTCTGGAACTTAGTGCAGAAGGTATTCCAGAAAAGGTCCAACAGGCTGTGGATATGGTTAATGCACATGTAACTGAAAGTCAATCGCCTTTGAAGGAGAATGAAATTCCTAGCTCTAGCGATGTAAATCTGAGTGTCACAGAGAAATTTGCAACTTCAGAGAATTATTCTACTGACCAAAGCAACATAGTTTCAGAAAAGAATGGCTCTTCAAATGATATTTCTGTAAAGTTAAAAGCTGAAGATGAGCATGTGAAACCCACAAGAAAGGAAGCTGATGCAGTTTCTAACATTCCTCATTCTCTACAAGTTGATGAATCTGTGATTGACAAAAGCATTGCTGGAAGCACTGAACCTCACAGCAATAATTCTGGCAAACGTCAAAGTTTCTTTTCTTGGATTAGCAGGTGGTGGCCATTCTGGAAAAATGGTGGAAACACTAATAATTTGACAGATCAACCGAATGAGATGCTTAGTAATACTGAAGAGCCCAAGTTTTCAAACCTGAACCAGGCAATTTGTCATTCTGAAGAGTCTGAGTCGTCAGATCTAAAACAAACAGTTTATCATTCTGAAGATTCTAAGTTTACAGAACAGAAACAAATGGTTAGTCACTCTAAAGAGCCCAAGTTATCTGAACTGAGACAGACAGTGAATCATTTTGTGGAGCCTGAGTTGTTTTCTAGTAGTTCCTTTTGGAGTGACATGAAATCTTTTGTTTTTACTGCCAAAGGATCAACTCTAATTTCCCGTTCTAAAAGCAGGAAGGATTTGATGCAGAAATTTCAAAAGTATGGGCCCCAGGTTCTTAGTTCTTGTAGTGAAAATGATCTCCTTCAACTGGTGGATTTGTTGATATCTGAGAAAAAATGGTTGGAGGAATGGCCCTCTCTGACCTTTCCTTTCCGTGTTGCCCTACAAACTGGGAAGAACTCAGTGGGCTTATCACATGGTGCAACTGGTTTGAGATCTCTCTTTCTAAACAAAGAAGCACGGAGCACCTTGCAAAAATCATCAGAAGGTGATATCGATAAAAGATATCAGAGTGTCCCTCACACTGGAGTTTCTTCTTCTGCCATTAAAGATAAGCACACTGAAAAGTCGAGAACTGACATGTTAGCAGATATTCAGAAACTTGTGGGTGAGACATTGAGAGAACACTCAGATGGGTATAATATAAGTATGATACCAAAACTTTTTCTGGAGAGGTATGGCTATCCTCTTGATGTTCAGAAGCTTGGTTATCAAAAGTTGGCAACCTTATTACAGATTCTGCCTGGAGTGAAAATGGAGTCATCTTACATCTTTCCAGTTTATCATCCCGTTTTTGCTTCTGATGTGGAAATGTCAGCTCTCAATACTTTAGTGAACAATTCTAGTGATGCTGGGCCGGATTTGGATAGAGAGTCATCTGATTCAAGCGCTCAAGATGGCCGCAAAGACACTCTATGGGAGGAATTAGGACCTGTCTCAGTTGCCAATCCCATCAGGAGTGACCTGGAAGCAAAATCAAGGCACGAGGCTATAAAGCTGGAGACTGCAATGCATCCTGATTATGAACCTTCACTCTCTGATGATGATTCTTCTGAATCTGAAGGAGATAGCTCTTGTTTAACTCAATCAGAAGAGGAAGGACGCTCAAGACGTAATGTGGAAGACAGTTCTCTTTTACAAACTCTGGAGTCATTTTACAGAAGTCAGGAAGAGGATAGTGTGAAGTCAGAAAATATGGATGCCAGAAGCAATGGGTTGACTGATGGTTTACATTCATCCAGGCATTTCATTCCAGGAGCACTTTCCAAAATTCATTCAGGGGTGGTGCATAAAGAGAAGCAAAAACCTCACAAGAGATATTCATTCATTGCTGACCCGGACTCACGTAAGAAGGACGAGCTAATCGATGGAATATTACAAAATTTGAGGAAATCAGATGAGTTGAAGGTGCAAAATTGA 3189 0.4067 MIKLLVSKNVSIISSFSSSSQLVRPLLLQICHFSASSYNHSFLRPHDDETRNVPISVWWEFDSCNLPVDVNGYRITHCITEALRTKGIKGPLQIRAFGDVLRLSTANQEALSSTGINLVHIPNGGKNPAHGSLLVELMHWVSKNPPPAHLFLITDNRVFADMLHRLRLDNYNILLATPAGAPKVLCNAATIMWHWNSLIRGQNLDGKHFNHPPDGLVGSWYGHHKVPLEDPYLDGEQSLIEEISSPISDSVLFKIPKEIVKQVQEVLNSYPRGISVSDLRAEIAKAGICLDKDYYGHKKFSRFLLSVANVQLRPGPDKVLFVFPIPQKWPGPFDNSSVPPIASFETVDGEEFNQVATSKLSGEVEKVVEDADVKPSAVSVDGEELKQVAAAKLSGGVAKVVGDSYVKPSMASSLELSAEGIPEKVQQAVDMVNAHVTESQSPLKENEIPSSSDVNLSVTEKFATSENYSTDQSNIVSEKNGSSNDISVKLKAEDEHVKPTRKEADAVSNIPHSLQVDESVIDKSIAGSTEPHSNNSGKRQSFFSWISRWWPFWKNGGNTNNLTDQPNEMLSNTEEPKFSNLNQAICHSEESESSDLKQTVYHSEDSKFTEQKQMVSHSKEPKLSELRQTVNHFVEPELFSSSSFWSDMKSFVFTAKGSTLISRSKSRKDLMQKFQKYGPQVLSSCSENDLLQLVDLLISEKKWLEEWPSLTFPFRVALQTGKNSVGLSHGATGLRSLFLNKEARSTLQKSSEGDIDKRYQSVPHTGVSSSAIKDKHTEKSRTDMLADIQKLVGETLREHSDGYNISMIPKLFLERYGYPLDVQKLGYQKLATLLQILPGVKMESSYIFPVYHPVFASDVEMSALNTLVNNSSDAGPDLDRESSDSSAQDGRKDTLWEELGPVSVANPIRSDLEAKSRHEAIKLETAMHPDYEPSLSDDDSSESEGDSSCLTQSEEEGRSRRNVEDSSLLQTLESFYRSQEEDSVKSENMDARSNGLTDGLHSSRHFIPGALSKIHSGVVHKEKQKPHKRYSFIADPDSRKKDELIDGILQNLRKSDELKVQN 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2349 1062 PANTHER LIMKAIN B LKAP 35 749 IPR024768 GO:0005777|GO:0010468
Prci4g2349 1062 Pfam NYN domain 55 189 IPR021139 GO:0004540
Prci4g2349 1062 MobiDBLite consensus disorder prediction 877 896 - -
Prci4g2349 1062 ProSiteProfiles OST-type HTH domain profile. 255 326 IPR025605 -
Prci4g2349 1062 Gene3D - 785 847 IPR041966 -
Prci4g2349 1062 MobiDBLite consensus disorder prediction 1017 1036 - -
Prci4g2349 1062 Pfam OST-HTH/LOTUS domain 256 317 IPR025605 -
Prci4g2349 1062 Pfam OST-HTH/LOTUS domain 785 843 IPR025605 -
Prci4g2349 1062 Gene3D - 254 328 IPR041966 -
Prci4g2349 1062 CDD LOTUS 785 840 - -
Prci4g2349 1062 CDD PIN_limkain_b1_N_like 54 178 - -
Prci4g2349 1062 ProSiteProfiles OST-type HTH domain profile. 784 860 IPR025605 -
Prci4g2349 1062 MobiDBLite consensus disorder prediction 870 898 - -
Prci4g2349 1062 MobiDBLite consensus disorder prediction 923 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2349 Prci-Chr4 36316261 36321114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2349 56 201 C2H2 Transcription Factor Family AT5G61190 39.726 4.79e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2349 - - pcin:129308480 2084.69