Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2337 ATGTGTTTCTTAAAGGTGGCGAATCCTAGTACGCACACCTCCAACAACGTTGTTCATGTTCCTTCTTCGTCGCTGCCGATTGTATTCCCAGGTATGGATAGGGACAGAGAGATGTCTGCTATGGTTTCTGCTCTCAGCCACGTCGTCGCCGGAGATATTCCCGGTGATTCCAGTGAAATTTCTTCAGGCGGTGGCGGCGGCGGCGGCCGAGGTGGAGGGGACTCTGTTACATTAAACTCCCTGTCAGATTCAACGATGCCGTCTTCGTGTCCTTCGTCTTACGGTGGTAACTCTGCTTTGAAGCGAAACAGGGAAGATTATATTAGAGGCTCTTCCACTGCAATTATTCCAACAGTTGCAGCAGAAGGTTCAAGAGGAGAGAGAATGGAAATGGAAAATGCAGTGTATGAATATAGCTGTAATGTAGAGACTGTGGGAAGATCAGGGGAAGGAAGAAGAAAGTACAGAGGAGTGAGACAGAGGCCATGGGGCAAGTGGGCGGCTGAGATAAGAGATCCTTTCAAAGCTGCCCGAGTTTGGTTGGGCACTTTTGACACGGCGGAGGCGGCTGCCCGGGCCTACGATGAAGCTGCCCTGCGTTTCAGAGGCAACAAGGCCAAGCTTAATTTCCCTGAGAATGTCAGGCTCCGGCAACCGCCTCCGACGACGGCGACGACCCATGTGAGAGGTTCCGGTTCTGCAACTACCCTTTTGTCCACTCCGACGTCCACCGAGCCGATTGTTCATACTGAAGCTCTTCATCACCACCGTCTTATGAGTTCTGAACCGGCGGCAGCGCCCGTTGATTTTTATAACTATTCGCAGTTTTCGGAGTTTCCCATGAATTTTTATGATCAGATGGTTATGACATCTTCAATGGCCCATCATTCTGAGTCATCCTCATTGCCGTCCTCATCTTCATCTTCTACATTGGCATCTTCTGTTACCTCTCAGCAGGGCCAAGCAGGTTTGCCTTATCCGGGTTGGGTCATGCCGGAAACGGGTCAGGAAAGTGGATCCGAATACTTACAATCAGCATGGTCAGCTTCGGGTCATAGTACTTCTTCCTCTGCGTGA 1077 0.507 MCFLKVANPSTHTSNNVVHVPSSSLPIVFPGMDRDREMSAMVSALSHVVAGDIPGDSSEISSGGGGGGGRGGGDSVTLNSLSDSTMPSSCPSSYGGNSALKRNREDYIRGSSTAIIPTVAAEGSRGERMEMENAVYEYSCNVETVGRSGEGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRQPPPTTATTHVRGSGSATTLLSTPTSTEPIVHTEALHHHRLMSSEPAAAPVDFYNYSQFSEFPMNFYDQMVMTSSMAHHSESSSLPSSSSSSTLASSVTSQQGQAGLPYPGWVMPETGQESGSEYLQSAWSASGHSTSSSA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2337 358 ProSiteProfiles AP2/ERF domain profile. 154 211 IPR001471 GO:0003700|GO:0006355
Prci4g2337 358 Pfam AP2 domain 154 203 IPR001471 GO:0003700|GO:0006355
Prci4g2337 358 MobiDBLite consensus disorder prediction 52 97 - -
Prci4g2337 358 PRINTS Ethylene responsive element binding protein signature 155 166 IPR001471 GO:0003700|GO:0006355
Prci4g2337 358 PRINTS Ethylene responsive element binding protein signature 177 193 IPR001471 GO:0003700|GO:0006355
Prci4g2337 358 CDD AP2 154 213 IPR001471 GO:0003700|GO:0006355
Prci4g2337 358 SMART rav1_2 154 217 IPR001471 GO:0003700|GO:0006355
Prci4g2337 358 MobiDBLite consensus disorder prediction 75 97 - -
Prci4g2337 358 MobiDBLite consensus disorder prediction 216 244 - -
Prci4g2337 358 PANTHER DNA-BINDING DOMAIN 142 313 IPR044808 GO:0003700|GO:0009873
Prci4g2337 358 MobiDBLite consensus disorder prediction 214 244 - -
Prci4g2337 358 MobiDBLite consensus disorder prediction 337 358 - -
Prci4g2337 358 FunFam Ethylene-responsive transcription factor 2 153 212 - -
Prci4g2337 358 MobiDBLite consensus disorder prediction 296 358 - -
Prci4g2337 358 Gene3D AP2/ERF domain 153 213 IPR036955 GO:0003700|GO:0006355
Prci4g2337 358 SUPERFAMILY DNA-binding domain 154 212 IPR016177 GO:0003677
Prci4g2337 358 MobiDBLite consensus disorder prediction 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2337 Prci-Chr4 36189834 36191963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2337 162 295 AP2-EREBP Transcription Factor Family AT5G64750 54.483 1.38e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci4g2337 AP2 4.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2337 - - pcin:129309833 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2337 4 36189834 36191963 Prci4g2337 4 36189834 36191963 ECH