Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2328 ATGAAACCTAAGTCCCCTACTAGCTATCGCTTCTCTCTCTTCATATTCTTCCCCCTTGCCGTTCTGCTTCTCCAATCTGCACCTTCATCCTCTGCTTTTTCAGCTTTCAGAGATTCCGCTCAACAATTGATCACCTTCAAGGCTTCTCTCCCAGACCAATCCGTACTCCATGACTGGCTTCCAAACCGAGACCCGTGTTCTTTCACTGGGATTTCCTGCAAGCAAACCCAGGTTTATTCTATAGACCTCAGCTCCATCTCCTTGAGGACTAACTTCAGTGTTGTCTCGGCTTATCTTCTCACTCTCGACCACCTTGAAGCTCTTTACCTCAAGCACGCCAATCTTACTGGTAGCATTTCTGTGCTCCCCCATGCGTTTAGGTGTGGTGCCTCATTGAGCAGTATAGATCTATCTCAGAACAGATTGTCTGGTTCTGTTTCGGACATATCCTATCTGAGCTCCTGTTCAAGTTTGAAATCTCTCAACCTTTCGGATAATGTTTTTGAGTTTTCTGGGAGAGATTCCACCGCCTTGAGGCTCAATCTCCAAGTCCTTGATATGTCTTTGAATAATGGTATTTCCGGTCCAAATGTTCTCCCTTGGATCTTATCTACAGGTTGTGATGATATGCGAGTGTTGGCTCTAAGAGGAAACAAAATCACCGGAGAAATCAATTTCTCAAACTGCCAGAAATTGCAGTATTTGGACCTTTCTGCTAACAATTTCTCTGTCGTTATTCCTTCGTTCGGTGAATGTTCGGCGCTGGAGTACTTGGACATATCTGCGAACAAGTATTTCGGCGACATTGGCCTCGTTCTCTCTTCCTGCAAGAAGCTCACCCACCTCAACGTTTCTAGCAACGAGTTCTCTGGTCCGGTTCCGTCACTTCCTGCGGATTCTCTGCGGTTCCTTTATCTTGCAGGCAACAAGTTCCATGGTCAGATACCGGAAGGATTGGCTGATTTGTGCACCACTCTCGTCGAGCTCGATCTTTCCTCAAACTTCCTCTCTGGTGCGGTTCCGCGCCGTTTTAGCACGTGTTCTTCACTGGAATTATTTGATATATCTAAAAACAAGTTTTCCGGTGAGTTACCGATTGATATTTTCTCGAAGATGAGCAGCTTGAAGAAGCTGGTTCTTTCATTCAATGGTTTTGTAGGTAATTTGCCGGATAATCTATCGAAGCTCACAAGCTTGGAATCGTTGGATTTGAGTTCCAATAACTTCTCAGGTTCCATACCTGGAAGTCTGTGTCAAGATCCTAAGAACAATTTGAAAGAACTATACCTACAGAATAATTTGCTCACGGGTTTGATTCCACCCACACTCAGCAACTGTTCTCAGCTTGTTTCATTGGATTTAAGTGTCAACTACCTGAAGGGGACTATCCCTTCAAGCTTGGGGTCTCTTTCGAAGCTTCGTGATTTGATTATGTGGCTAAATCAGCTTCAAGGCGAAATACCACAAGAGCTCACGTATATCAAGACCCTTGAGAATTTGCTTTTGGACTTCAATGAGCTCACAGGGAACATTCCTTCTGGTTTAAGAAACTGCACCGCCTTGAATTGGATATCCTTGTCTAATAACAGGTTGAGCGGGGAGATTCCTGCTTGGATTGGCCAGCTCTCCAATCTTGCAATCCTGAAACTGAGCAATAACTCATTCTCTGGGAGGATTCCGCCGGAACTTGGTGATTGTCGCAGTTTGATATGGTTGGATCTAAATACAAATCTCCTTAATGGGTCAATTCCTCCTGAATTGTTCAAGCAATCTGGCAAAATCACCGTGGATTTCATACGTGGTAAAACTTATGTGTATATCAAGAATGATGGAAGCGAAGCCTGCCATGGAGCTGGTAATTTACTGGAGTTTGCTGGGATCATTGCAGAGCAGTTGAACAGAATTTCTACAAGGAATCCCTGTAACTTCACTAGAGTTTATAGTGGTAATCTCCAACCTACGTTTAGTAACAATGGGTCTATGATTTTTTTGGATCTTTCATACAATATGTTGTCGGGTAGTATACCGAAGGAGATTGGGAGCTTGTACTATGTAGACATTTTGAATTTGGGTCACAACAACCTATCTGGAAATATTCCAGAAGAGCTTGGAAAGGCAATCAAACTGGACATACTTGATCTCTCATGGAATAGGCTTGAAGGACCAATTCCACAGTCTTTGACCGGCCTATCCATGCTCTCTGAAATCAATCTGTCAAACAACTTTCTATCAGGAGTGATTCCTGACTCTGCTCAATTTGTAACCTTTTCTCCCAACAGTTTCATGAATAATTCTGGTCTCTGCGGATACCCTCTCGCTCCATGTGGGACACACTCAGGATTAAGTTCAGATGCCCAACATCAGAAATCTCGCAGGAGACAAGCATCTCTTGCTGGTAGTTTAGCTATGGGATTGCTATTCTCCCTCTTCTGCATCTTTGGTGTAGTTATAATTGCCCTAGAGACCAGAAAGAGGAGGAAGAAGAAGGAAGCTGCCCTAGATGCCTACATGGACAACCATTCCCCTTCAGGTACGGGCAACAATACGAGCTGGAAGCTTACAAGTGCCCGTGAAGCGCTTAGCATAAACCTTGCAGCATTCGAGAAGCCCATCCGGAAACTTACCTTTGCGGATCTACTTGAAGCTACTAACGGCTTTCACAATGACAGTCTCATTGGTTCTGGTGGTTTTGGCGATGTCTACAAGGCTCAATTGAAGGATGGAAGTGTTGTGGCCATCAAGAAACTGATACATATTAGTGGGCAGGGCGACAGGGAATTCACAGCTGAAATGGAAACCATAGGGAAAATCAAGCATCGTAACCTGGTTCCCCTTCTGGGTTACTGCAAGGTTGGAGAAGAAAGACTCTTGGTTTATGAATTCATGAAATATGGAAGTCTAGAAGATGTTTTGCACGACCGGAAGAAAGCCGGGGTCAAGCTGAACTGGGCAGTGAGAAGGAAAATTGCCATTGGGGCTGCTAGGGGATTGGCTTTTCTTCACCACAATTGCATCCCACACATCATTCATAGAGACATGAAGTCCAGTAATGTATTGCTTGATGAGAACCTGGAATCCAGAGTCTCTGATTTTGGAATGGCTAGGCTTATGAGTGCTGTGGATACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCTGGTTATGTTCCTCCTGAATATTATCAGAGTTTTAGATGCTCCACTAAAGGTGATGTATATAGTTATGGTGTAGTTTTATTGGAGCTGCTTACTGGGAGACGCCCGACCGATTCGGCAGATTTTGGCGATAATAATCTCGTGGGATGGGTTAAACAGCATGCTAAACTGAAAGTCAATGAAGTTTTTGATCCAGAGCTATTAAAAGAGGATCCTAGTCTTGAGGTTGAGCTTCAACAACACTTGAAAGTCGCACATGCTTGCTTGGATGATCGACCATGGCGGCGTCCCACGATGATTCAAGTCATGGCGATGTTCAAGGAAATCCAGGCTGGGTCCGGCATTGATTCTCAGTCCACCATAGACACTGAAGATGGAGGTTTTGGTGCAGTTGAAATGGTAGATATGAGCATAAAAGAAGCCCCTGAACTAAGGCCATAG 3597 0.4443 MKPKSPTSYRFSLFIFFPLAVLLLQSAPSSSAFSAFRDSAQQLITFKASLPDQSVLHDWLPNRDPCSFTGISCKQTQVYSIDLSSISLRTNFSVVSAYLLTLDHLEALYLKHANLTGSISVLPHAFRCGASLSSIDLSQNRLSGSVSDISYLSSCSSLKSLNLSDNVFEFSGRDSTALRLNLQVLDMSLNNGISGPNVLPWILSTGCDDMRVLALRGNKITGEINFSNCQKLQYLDLSANNFSVVIPSFGECSALEYLDISANKYFGDIGLVLSSCKKLTHLNVSSNEFSGPVPSLPADSLRFLYLAGNKFHGQIPEGLADLCTTLVELDLSSNFLSGAVPRRFSTCSSLELFDISKNKFSGELPIDIFSKMSSLKKLVLSFNGFVGNLPDNLSKLTSLESLDLSSNNFSGSIPGSLCQDPKNNLKELYLQNNLLTGLIPPTLSNCSQLVSLDLSVNYLKGTIPSSLGSLSKLRDLIMWLNQLQGEIPQELTYIKTLENLLLDFNELTGNIPSGLRNCTALNWISLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCRSLIWLDLNTNLLNGSIPPELFKQSGKITVDFIRGKTYVYIKNDGSEACHGAGNLLEFAGIIAEQLNRISTRNPCNFTRVYSGNLQPTFSNNGSMIFLDLSYNMLSGSIPKEIGSLYYVDILNLGHNNLSGNIPEELGKAIKLDILDLSWNRLEGPIPQSLTGLSMLSEINLSNNFLSGVIPDSAQFVTFSPNSFMNNSGLCGYPLAPCGTHSGLSSDAQHQKSRRRQASLAGSLAMGLLFSLFCIFGVVIIALETRKRRKKKEAALDAYMDNHSPSGTGNNTSWKLTSAREALSINLAAFEKPIRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEFMKYGSLEDVLHDRKKAGVKLNWAVRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLESRVSDFGMARLMSAVDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRRPTDSADFGDNNLVGWVKQHAKLKVNEVFDPELLKEDPSLEVELQQHLKVAHACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTIDTEDGGFGAVEMVDMSIKEAPELRP 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2328 1198 PRINTS Leucine-rich repeat signature 132 145 - -
Prci4g2328 1198 PRINTS Leucine-rich repeat signature 396 409 - -
Prci4g2328 1198 SMART serkin_6 886 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2328 1198 CDD STKc_IRAK 892 1161 - -
Prci4g2328 1198 Pfam Protein kinase domain 886 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2328 1198 Gene3D Ribonuclease Inhibitor 43 775 IPR032675 -
Prci4g2328 1198 SUPERFAMILY L domain-like 648 774 - -
Prci4g2328 1198 ProSitePatterns Protein kinases ATP-binding region signature. 892 915 IPR017441 GO:0005524
Prci4g2328 1198 Pfam Leucine rich repeat N-terminal domain 39 73 IPR013210 -
Prci4g2328 1198 Gene3D - 597 657 - -
Prci4g2328 1198 FunFam Serine/threonine-protein kinase BRI1-like 1 599 656 - -
Prci4g2328 1198 Pfam Brassinosteroid receptor island domain 592 656 IPR045381 -
Prci4g2328 1198 SUPERFAMILY L domain-like 64 360 - -
Prci4g2328 1198 Pfam Leucine Rich repeat 275 290 IPR001611 GO:0005515
Prci4g2328 1198 Pfam Leucine Rich repeat 396 411 IPR001611 GO:0005515
Prci4g2328 1198 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 424 1160 - -
Prci4g2328 1198 SUPERFAMILY Protein kinase-like (PK-like) 872 1162 IPR011009 -
Prci4g2328 1198 Pfam Leucine rich repeat 325 384 IPR001611 GO:0005515
Prci4g2328 1198 SMART LRR_typ_2 396 420 IPR003591 -
Prci4g2328 1198 SMART LRR_typ_2 542 566 IPR003591 -
Prci4g2328 1198 SMART LRR_typ_2 730 753 IPR003591 -
Prci4g2328 1198 SMART LRR_typ_2 102 128 IPR003591 -
Prci4g2328 1198 SMART LRR_typ_2 424 446 IPR003591 -
Prci4g2328 1198 SMART LRR_typ_2 567 590 IPR003591 -
Prci4g2328 1198 Pfam Leucine Rich Repeat 424 446 IPR001611 GO:0005515
Prci4g2328 1198 Pfam Leucine Rich Repeat 708 730 IPR001611 GO:0005515
Prci4g2328 1198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1008 1020 IPR008271 GO:0004672|GO:0006468
Prci4g2328 1198 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 653 775 - -
Prci4g2328 1198 Gene3D Transferase(Phosphotransferase) domain 1 962 1163 - -
Prci4g2328 1198 SUPERFAMILY RNI-like 300 587 - -
Prci4g2328 1198 FunFam serine/threonine-protein kinase BRI1-like 2 847 961 - -
Prci4g2328 1198 ProSiteProfiles Protein kinase domain profile. 886 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2328 1198 FunFam Brassinosteroid LRR receptor kinase 962 1163 - -
Prci4g2328 1198 Gene3D Phosphorylase Kinase; domain 1 846 961 - -
Prci4g2328 1198 FunFam Brassinosteroid LRR receptor kinase 130 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2328 Prci-Chr4 36081320 36085416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2328 25 1195 Receptor kinase-like Gene Family AT4G39400 69.466 0.0 1583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Prci4g2328 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2328 K13415 - qsa:O6P43_023302 1776.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2328 4 36081320 36085416 Prci4g2328 4 36081320 36085416 ECH