Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2310 ATGGACTTGACCGCGAAGCTTCATCACCTTGAGCTCAGTTCAAGCTTCCTCACCGGCACTGTAATTTTGGACACACGGAAGGCCGCTGTTCGACCTTACGTTCGGCCTGCTTCAAGTCGCGTGGTTTCTCAAACCCTTAGAGGTAATGCTAATTTGGTTAAATCCACTCAATTTATTGGTACTAGAAGAGCGAATTTTAGTATCGCTGCTAGTTCGTCTGCGGTTGCCGTCGAGACATCGGCGGCAGAATCCACCACCGAAGAGGACATTGAGTCTTTGTTTTCGGACACTTCGGTTGATGAATTTGAGAATAGACGTGTGAACAAGCAATCGAGTACCGGTGCGTCGAGCATTTCATCTGGTGTCAAGTTAGAGAACGTGAGCAAAAGCTACAAGGGCGTCACTGTTTTGAAAGATGTTAGTTGGGAAGTGAAAAAGGGCGAAAAAGTGGGATTGGTTGGCGTAAATGGTGCAGGGAAGACGACACAGATGAGAATTATTGCTGGCCAGGAGGAGCCAGACTCGGGGAATGTGATAAAAGCCAAGCCAAATATGAAAATTGCTTTTCTAAATCAAGAATTTGAGGTATCTCTGAGTAGGACGGTGAGGGAGGAATTTCTAAGTGCGTTTAAGGAGGAGATGGAGATAGCTGGTAAGTTGGACAAGGTGCAGAAGGCACTTGAGGGTGCTGTGAATGATTTAGAATTGATGGGAAGGCTTCTAGATGAGTTTGATTTGCTCCAGAGGAAGGCCCAGGCAGTAAGCTTGGATGTAGTAGATGCAAAGGTAAGTAAATTGATGCCAGAACTTGGGTTTTCCTCAGATGATTCAGACAGGCTGGTGGCGTCGTTTAGTAGTGGATGGCAGATGAGGATGTCCCTTGGAAAGATCTTACTTCAGGAGCCAGATTTATTACTGTTGGATGAACCAACAAATCACCTTGACCTTGACACCATTGAGTGGCTCGAAGGCTATCTTAACAAGCAGGATGTGCCAATGGTCATCATTTCCCATGACAGGGCTTTTCTTGATCAGCTGTGTACAAAAATCGTGGAAACTGACATGGGTGTATCCAGAACATATGAGGGAAATTACTCCCAGTATGTAGTTTCAAAGGCAGCATGGATTGAAGCACAGTATGCTGCATGGGAGAAACAGCAGAAAGAAATTGAGCAGACCAAGGACTTAATAAATAGGTTAGGTGCTGGAGTGAATTCTGGCCGTGCTTCATCTGCTGAGAAGAAGTTGGAGAGACTTCAAGAAGTGGAACTAGTAGAGAAGCCATTTCAACGGAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGAAGTGGAAGATCCGTTGTAACAATTAAGAACTTGGAATTTGGATTTGAAGATAAAGCGCTCTTCAAAAAAGCCAATCTTACAATTGAAAAGGGGGAAAAAATTGCCGTTATTGGTCCAAATGGATGTGGCAAGAGTACTTTGCTAAAGCTAATAATGGGTTTAGAGAAGCCAAACAAGGGTGAAGTTGTGCTTGGGGGGCATAATGTATTACCAAACTATTTTGAGCAAAATCAGGCTGAGGCACTTGATCTGGAGAAGACAGTGCTTGAGACAATAGAAGAAGCTGCTGAGGACTGGAGGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTCAAATCTGACATGCTTGACCGGAAAGTTTCTCTACTGAGTGGTGGTGAGAAGGCACGTCTGGCTTTTTGCAAATTTATGGTAACACCGTCAACTCTGCTTGTGTTGGACGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAATGAGTACAAGGGCACTGTTATTACAGTGTCTCATGATCGATACTTCATAAAGCAGATAGTTAATAGAGTCATAGAAGTTCAAGATGGAACTTTGCAGGATTATGCAGGAGACTATAATTACTATTTAGAAAAGAATCTTGATGCCAGGGCTAGAGAGCTTGAACGGGAGGCAGAGCTTGAAGACAAAGCTCCAAAAGTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCAAGGAAGAAACAGAAGATGCAGGCTTTTCAGGCAGCAAAGCAGAAGTCAAAAGGGTCGAAAAATGCCAAGAGATGGAATTGA 2151 0.4365 MDLTAKLHHLELSSSFLTGTVILDTRKAAVRPYVRPASSRVVSQTLRGNANLVKSTQFIGTRRANFSIAASSSAVAVETSAAESTTEEDIESLFSDTSVDEFENRRVNKQSSTGASSISSGVKLENVSKSYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKAKPNMKIAFLNQEFEVSLSRTVREEFLSAFKEEMEIAGKLDKVQKALEGAVNDLELMGRLLDEFDLLQRKAQAVSLDVVDAKVSKLMPELGFSSDDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTYEGNYSQYVVSKAAWIEAQYAAWEKQQKEIEQTKDLINRLGAGVNSGRASSAEKKLERLQEVELVEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGFEDKALFKKANLTIEKGEKIAVIGPNGCGKSTLLKLIMGLEKPNKGEVVLGGHNVLPNYFEQNQAEALDLEKTVLETIEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYKGTVITVSHDRYFIKQIVNRVIEVQDGTLQDYAGDYNYYLEKNLDARARELEREAELEDKAPKVKAKSKMSKAEKEARKKQKMQAFQAAKQKSKGSKNAKRWN 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2310 716 Pfam ABC transporter 351 438 IPR032781 -
Prci4g2310 716 Gene3D - 411 680 IPR027417 -
Prci4g2310 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 429 656 IPR027417 -
Prci4g2310 716 Pfam ABC transporter 137 312 IPR003439 GO:0005524
Prci4g2310 716 Coils Coil 676 705 - -
Prci4g2310 716 MobiDBLite consensus disorder prediction 667 716 - -
Prci4g2310 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 449 664 IPR003439 GO:0005524
Prci4g2310 716 FunFam ABC transporter ATP-binding protein 409 676 - -
Prci4g2310 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 378 IPR027417 -
Prci4g2310 716 ProSitePatterns ABC transporters family signature. 284 298 IPR017871 GO:0005524|GO:0016887
Prci4g2310 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 122 380 IPR003439 GO:0005524
Prci4g2310 716 MobiDBLite consensus disorder prediction 667 696 - -
Prci4g2310 716 CDD ABCF_EF-3 449 641 - -
Prci4g2310 716 FunFam Putative ABC transporter ATP-binding component 123 407 - -
Prci4g2310 716 Coils Coil 654 674 - -
Prci4g2310 716 Gene3D - 118 402 IPR027417 -
Prci4g2310 716 ProSitePatterns ABC transporters family signature. 568 582 IPR017871 GO:0005524|GO:0016887
Prci4g2310 716 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 121 708 - -
Prci4g2310 716 SMART AAA_5 473 641 IPR003593 GO:0016887
Prci4g2310 716 SMART AAA_5 146 356 IPR003593 GO:0016887
Prci4g2310 716 Pfam ABC transporter 465 596 IPR003439 GO:0005524
Prci4g2310 716 CDD ABCF_EF-3 122 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2310 Prci-Chr4 35850934 35856609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2310 446 666 Calmodulin-binding Proteins AT2G36910 26.316 1.89e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2310 - - qsa:O6P43_030405 1108.2