Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci4g2282 | ATGAATTCTCCATCCACACAGTTTGTTTCCCCAAGAAGGATGGGTGTGTATGATCCAATCCAACAGATTAATATGTGGGGAGAAAGTTTCAAAAGTAATGGTAATTTAAATGCCTTAATTGGTGAAGCAGGTGGAAAGTTAATTAATCAGCCAGAGGATGCTTCTCATAACGCATTGGGTACGTCCCAGATGTATGGACAAGAAGCTAATAAGCCTATTGATAAGATACAAAGACGTCTTGCACAAAATAGAGAGGCTGCTCGTAAGAGTCGTATACGGAAGAAGGCCTATGTGCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCCAGTTAGAGCAAGAGCTCAACCATGCAAGACAACAGGGTTTATATATGGGCGGGGCATTAGATTCTGATAATCTGGGTTTTGCTGGAACTGTTAATTCAGGTATTACGACCTTTGAGATGGAGTATGGACACTGGCTTGAAAAGCAAAATAGACTAATCTGTGAACTAAGAGGTGCTTTAAATGCTCATATTAGCGACATGGAGCTCAGGATGCTTGTAGATAGCATAATGAATCACTATTTTGAACTCTATCAAAAGAAGTCTGCTGCTTCAAAAGCAGATGTTTTCTATGTGATGTTTGGTATGTGGAAAACTACAGCTGAGCGATTTTTCATGTGGATTGGAGGCTTTCGCCCCTCTAAGCTTCTAAAGGTCATTGTCCCTCTGATTGAACCCTTGACAGAGCAACAACGGTTTGATATCTCTAACCTCGAACAATCTTGCCAGCAAGCAGAAGATGCCCTTTCTCAAGGCATGGATAAACTCCAGCAAACACTTGGCGATACTATAACGGCTGGACCACTAGTTGAAGGAACTTATATTCCTCAGATGGCTGCTGCAATGGAGAAAATGGAAGCTCTTGTGAGCTTTGTAAACCAGGCTGATCATCTTCGTCAGGAAACATTGCAGCAAATGTTTCGAATCCTAACAATCCGTCAGGCGGCTCGATACCTGCTTACTCTAGGTGAATATTTCCAACGCCTACGAGCCTTGAGCTCACTTTTGGCTAATCGCCCACAGGAGCCAGCTTAG | 1080 | 0.4259 | MNSPSTQFVSPRRMGVYDPIQQINMWGESFKSNGNLNALIGEAGGKLINQPEDASHNALGTSQMYGQEANKPIDKIQRRLAQNREAARKSRIRKKAYVQQLESSRLKLIQLEQELNHARQQGLYMGGALDSDNLGFAGTVNSGITTFEMEYGHWLEKQNRLICELRGALNAHISDMELRMLVDSIMNHYFELYQKKSAASKADVFYVMFGMWKTTAERFFMWIGGFRPSKLLKVIVPLIEPLTEQQRFDISNLEQSCQQAEDALSQGMDKLQQTLGDTITAGPLVEGTYIPQMAAAMEKMEALVSFVNQADHLRQETLQQMFRILTIRQAARYLLTLGEYFQRLRALSSLLANRPQEPA | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci4g2282 | 359 | Coils | Coil | 250 | 270 | - | - | |
| Prci4g2282 | 359 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 78 | 93 | IPR004827 | GO:0003700|GO:0006355 | |
| Prci4g2282 | 359 | FunFam | BZIP family transcription factor | 74 | 123 | - | - | |
| Prci4g2282 | 359 | Coils | Coil | 94 | 121 | - | - | |
| Prci4g2282 | 359 | SMART | brlzneu | 71 | 142 | IPR004827 | GO:0003700|GO:0006355 | |
| Prci4g2282 | 359 | ProSiteProfiles | DOG1 domain profile. | 144 | 354 | IPR025422 | GO:0006351|GO:0043565 | |
| Prci4g2282 | 359 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 357 | - | - | |
| Prci4g2282 | 359 | Gene3D | - | 74 | 123 | - | - | |
| Prci4g2282 | 359 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 73 | 115 | IPR004827 | GO:0003700|GO:0006355 | |
| Prci4g2282 | 359 | Pfam | Seed dormancy control | 162 | 236 | IPR025422 | GO:0006351|GO:0043565 | |
| Prci4g2282 | 359 | Pfam | bZIP transcription factor | 75 | 104 | IPR004827 | GO:0003700|GO:0006355 | |
| Prci4g2282 | 359 | SUPERFAMILY | Leucine zipper domain | 75 | 116 | IPR046347 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci4g2282 | Prci-Chr4 | 35578466 | 35585398 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci4g2282 | 1 | 359 | Calmodulin-binding Proteins | AT5G65210 | 66.033 | 5.38e-179 | 499 |
Transcription factors information