Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2277 ATGGAAGCAACCTCGAGGCCTCCCTCACAGGAAGATGCTTTGACTTTGAATTCCTTACCAGAAGCCACGATGGCTCTCTCTGAGATCTTCTCTCAACTTTGCACCAAGGCCGTAGTCCTGTTGGCTCTGCTGCTGATACAACTCATGCTCCTCGTAAAGAAGCTCAGGTCAGATCCGCGTCCGGTCACCACCACCCAATATCTCAAACTCATCGAACAGAAGAACCCCACAATTTGTTTCACCAAGAGATTGAGGCAAGAAGGTGCAGAGTGCAGGGTGTGCTTATCTGAATTCCAGGAAGGGGAAAAAGTGAGGAACTTGAAATGTAAACACACATTTCACAGAGATTGCTTGGACAAATGGTTGCAGCAATATTGGGCTACCTGCCCTCTTTGCAGGAACCAAGTTCTTCCAGATGATGTTGTGGCCAAGTATCGTGAGCTTCAGAATCAGAGGGACTACGTCTTCTCCTTTTGGGATCTTGCTGAATAA 492 0.4756 MEATSRPPSQEDALTLNSLPEATMALSEIFSQLCTKAVVLLALLLIQLMLLVKKLRSDPRPVTTTQYLKLIEQKNPTICFTKRLRQEGAECRVCLSEFQEGEKVRNLKCKHTFHRDCLDKWLQQYWATCPLCRNQVLPDDVVAKYRELQNQRDYVFSFWDLAE 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2277 163 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
Prci4g2277 163 SUPERFAMILY RING/U-box 72 139 - -
Prci4g2277 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 138 IPR013083 -
Prci4g2277 163 PANTHER - 25 152 - -
Prci4g2277 163 Pfam Ring finger domain 90 133 IPR001841 -
Prci4g2277 163 SMART ring_2 91 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2277 Prci-Chr4 35513111 35515793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2277 89 158 C3H Transcription Factor Family AT1G15100 47.143 2.48e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2277 K16282 - gmx:102668078 177.948