Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2275 ATGGCTCTCTCTGAGATCTTCTCTCAACTTTGCACCAAGGCCGTAGTCCTGTTGGCTCTGCTGCTGATACAACTCATGCTCCTCGTAAAGAAGCTCAGGTCAGATCCGCGTCCGGTCACCACCACCCAATATCTCAAACTCATCGAACAGAAGAACCCCACAATTTGTTTCACCAAGAGATTGAGGCAAGAAGGTGCAGAGTGCAGGGTGTGCTTATCTGAATTCCAGGAAGGGGAAAAAGTGAGGAACTTGAAATGTAAACACACATTTCACAGAGATTGCTTGGACAAATGGTTGCAGCAATATTGGGCTACCTGCCCTCTTTGCAGGAACCAAGTTCTTCCAGATGATGTTGTGGCCAAGTATCGTGAGCTTCAGAATCAGAGAAGGAGACGAGTCATCGGGGATATTTTGAAAAAGGTAGAGGTTTTAATTAATTCTGGAGTCCACATCAGAAGTGAAAAATCTCAGGCAGATATTTTTTGTGAGAAACCCATCTGCACAACCATCCTTTTGATGATTAATTTCCTGTGA 534 0.4457 MALSEIFSQLCTKAVVLLALLLIQLMLLVKKLRSDPRPVTTTQYLKLIEQKNPTICFTKRLRQEGAECRVCLSEFQEGEKVRNLKCKHTFHRDCLDKWLQQYWATCPLCRNQVLPDDVVAKYRELQNQRRRRVIGDILKKVEVLINSGVHIRSEKSQADIFCEKPICTTILLMINFL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2275 177 Pfam Ring finger domain 67 110 IPR001841 -
Prci4g2275 177 ProSiteProfiles Zinc finger RING-type profile. 68 110 IPR001841 -
Prci4g2275 177 SMART ring_2 68 109 IPR001841 -
Prci4g2275 177 PANTHER - 2 130 - -
Prci4g2275 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 31 115 IPR013083 -
Prci4g2275 177 SUPERFAMILY RING/U-box 49 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2275 Prci-Chr4 35513111 35515793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2275 66 121 C3H Transcription Factor Family AT1G15100 53.571 8.84e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2275 K16282 - gmx:102668078 177.948