Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2267 ATGACGACTACACTTGCCTGGAGGTTTGGTTCCAACAATGGTGGCAGCCTTGCTGCTAATGATATGGAAAGAAATGGCGAGGGTAATATTCCAGATTCAGAGCCCCCTACTCCACATTCTGTTTTGAAGATGGGATTGAGAGAGCGCAGCAGCAGCATGGAGGATCCAGATGGGACATTAGCAAGTGTTGCCCAATGCATCGAGCAGCTGCGACAGAGCTCATCCTCTGCACAAGAGAAGGAATACTCCTTAAGGCAGTTATCGGAGCTTATTGATGTGCGTGAAAATGCATTTAGCGCTGTTGGATCTCATTCTCAGGCAGTGCCAGTGCTTGTTTCTCTTCTCCGATCAGGTTCAGTGAGTGTGAAGATTGAGGCAGCGACTGTTTTGGGCTCCCTTTGTAAAGAAAATGAGCTAAGAGTGAAAGTGTTACTTGGAGGATGCATTCCTCCATTGCTTGGTCTACTTAAATCCAGTTCAGCTGATGGTCAAGTAGCTGCTGCGAAGACTATTTACGCTGTCTCTCAAGGTGGCTCAAAAGACCACGTTGGATCAAAAATTTTTTCAACTGAGGGAGTGGTACCTGTGCTGTGGGAGCAGCTTCAGAAAGGGCTGAAGACTGGAAATGTAGTTGATGGTTTATTGACCGGAGCCTTGAAAAATCTCTCTAGCAATACGGAGGGATTCTGGAATGCAACAATACAAGCTGGAGGAGTGGACGTGTTAATGAAGTTATTGACAGCAGGTCATCCTAGCACTTTAGCTAATGTGTGCTTCCTACTTGCCAGCATGATGATTGAGGATGCGTCTGTTTGTTCTAAGGTGTTGGCTTCAGAGGCGACAAAACAGCTCCTAAAATTATTGGGCCCTGGTAATGACGCCCCTATTAGAGCTGAAGCAGCCGGTGCTCTGAAATCCTTGTCTTCTCAGTGCAAAGAAGCAAGGCGGGAGATAGCTAATTCTAATGGCATTCCTGCTCTGATCAATGCTACCATAGCTCCTTCGAAAGAGTTCATGCAGGGCGAGCATGCTCAAGCATTGCAGGAAAATGCCATGTGCGCGCTGGCTAACATCTCTGGTGGTTTGTCTTATGTCATCTCCAGCCTTGGTCAAAGCCTTGAATCGTGCACCTCAGCTACTCAAATTGCTGACACATTGGGGGCTTTAGCTTCAGCTCTTATGATATATGATAGCAAGGCTGAAGCTACTAGAACATCAGATCCGTTGGTAGTGGAGCAAACATTGCTCAAGCAATTCAAACCTCAATCACCTTTTCTTGTGAAGGAACGAACCATTGAAGCCCTGGCTAGTTTGTATGGCAATCCCGTACTGTCAGTTAAGCTTGCAAATTCAGATGCAAAACACCTGCTTGTCGGATTAATAACGATGGCTGTCAATGAAGTGCAAGATGATCTTTTAAGATCTCTCCTTACATTGTGCAGCAATGAAGGCAGTCTGTGGCGTGCCCTTCAGGGCCGTGAAGGAGTTCAGCTGTTGATATCCCTTCTCGGGCTTTCATCAGAACAACAGCAAGAATGTGCAGTCGCTCTGCTATGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCCGGTGGTATACCTCCTTTAGTTCAAATTTTGGAGACAGGATCCACAAAAGCAAAAGAAGACTCGGCAAAAATCCTTACAAACCTGTGCAATCACAGCGAAGATATACGTGCTTGTGTGGAGAGTGCTAATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAGGAGATAGCAGCAAAAACCTTAAATCACTTGATTCATAAATCTGATACTACCACAATCAGTCAGCTTACAGCCTTATTGACAAGCGATCTGCCTGAATCGAAGGTCTATGTTTTGGATGCTTTGAAGAGCATGCTGTCAGTTGCCCCTCTCGGTGACATTCAACGAGAAGGTAGTGCTGCAAGTGATGCAATTGATACAATGATAAAATTAATGAGCTCTACGAAAGAAGAAACTCAAGCTAAGTCAGCATCAGCTCTGGCAGGCATCTTTGAAATGAGGAAAGATGTGCGTGAAAGCAGTATTGCTGTTAAAACTCTTTTGTCAGCCATGAAGTTGCTTAATGTTGAATCTGAAAGTATCCAAATAGAGTCTTCAAGGTGCCTTGCAGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTTCTGTTGGTAGAGATGCATTTCTCCACCTAATTACACTAGCAAATTCTTCTGATTTGGATGTTGTAGAGTTGGCAACATGTGCTGTGGCTAATCTTATTTTAGATAGTGAGATTTCAGAGAAGGCTGTTGCTGAGGAAGTTATCATGCCGGCTACCAGAGTATTACGTGAAGGCACAATTTCTGGAAAAGTTCATGCAGCAGCAGCAATTGCTCGCCTCATACATTCTCGACAAGTTGATTATTCTATAACTGAATGTGTGAATCGTGCTGGGACTGTGCTTGCTTTGGTTTCCTTCCTGGATTCTGCTATTAATGGATCAGTTTCTACCTCTGAGGCTATAGAAGCACTTGCTGTTCTGTCCAGGTTGGACCAGAATAGTGAACATGTTAAACCAGCATGGGCTGTATTGGCTGAATTCCCTGAAAGCATAAACCCAATAGTGCTGTCTATCGCTGAATCAACACCAATGTTTCAGGATAAAGCTATCGAGATATTATCCCAGTTATGCAGGGATCAGCCCGTTGTTCTTGGAAACAATGTTGTTTCAGCCAATGGATGCTTGAGTTCGTTGGCTAAAAGGGTAATTGGTACTAAAAATGTAAAGGTCAAAATTGGGGGAGCTGCACTTATTAGTTGTGCTGCCAAAGTAAGCCACCAGAGAGTGTTGGAGGAACTCAACCAATCAAACTTGTGTGTTGATCTTGTTCAATCTCTTGTTAATATGCTTTCTTCTGCATTGCCTTTGTCATACCAAGGTGAAGGAAACAAGGAATTCATTAGCATTTTCATACATAGAAAAGAAGACGCCAATGGTTGTAAATCCAGCACTGGCACCATTATATCTGATGCTAAGCTAGCTATATGGTTATTATCTATTCTTGCTTGTCATGATGAACAATGTAAAATTGCAATAATGGAGGCTGGAGCAATTGACATTCTCACTGAAAAAATATCAGACTGTTACTCGCAATATAGCCAGATTGATTATAAAGAAGATAGTAGCATGTGGATTTGTGCATTATTGTTGGCTGTATTATTTCAAGATAGAGATATCATCAGAGCACATGCTACCATGAAATCTGTACCAGCTATTGCCAGTTTATTGAGGTCAGAGGAATTAGATAACAGATATTTTGCGGCACAATCAATAGCTAGCCTAGTCTGTAATGGAAGTAGGGGTACACTACTGTCTGTTGCAAACTCAGGGGCTGCAAGTGGGCTAATCTCCCTACTTGGCTGTGCTGATGTTGATATACAGGACCTTCTGGACCTGTCAGAGGAGTTCTCCTTGGTTCGTTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTCAGAGTTGATGACATTAGGGTTGGTGCCACTTCACGGAAGGCAATACCTGCCCTTGTTGATCTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCGTTTTTAGCTCTTGGGCTTCTAACTCAGCTCGCCAGAGATTGCCCATCCAATAAGATTGTAATGGTAGAATCTGGGGCCTTGGAGGCACTTACGAAGTATCTTTCACTGGGTCCCCAAGATGCAACCGAAGAAGCTGCTACTGATCTGTTAGGAATTCTGTTTGACTGTGCTGATATCCGGAGACATGAGGCAGCGTTTGGTGCTGTTACTCAACTTGTAGCTGTCTTACGTTTAGGGGGGAGAGGTGCGAGGTACAGTGCTGCCAAAGCCCTGGAAAACTTGTTCTCTGCTGATCAGATTAGGAATGCAGAAACATCTCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTAATACTGGTTTGGAGAAGGAGCAGCATGCTGCAATAGCTACGCTCATTAGGCTCCTAAGTGAAAATCCATCTAGAGCGCTAGCAGTTGTTGATGTTGAAATGAATGCAGTTGATGTGCTTTGTAGGATCCTTTCATCGAATTGTTCATTGGACCTCAAAGGGGATGCTGCGGAATTATGTTGTGTCCTGTTTGGAAATACACGGATTAGGTCCTCAATGGCTGCTGCACGCTGTGTTGAACCTCTAGTTTCTCTCCTTGTAAGTGAGATTAGTGCTGCTCAGCATTCGGTTGTCCGCGCACTGGATAGGCTTGTTGATGACGAGCAATTGGCTGAACTAGTTGCTGCTCATGGTGCCATTATTCCTCTTGTTGGTCTTCTCTATGGCAGGAACTTTTTGCTCCATGAGGCTATTTCTAGAACTCTGGTTAAACTAGGGAAAGACAGACCTGCTTGTAAAATGGAAATGGTCAAAGCTGGAGTTATTGAAAGCATACTTGACATTCTTCATGAAGCACCTGATTATCTATGCGCTGCATTTGCTGAATTGCTGCGTATATTGACTAACAATGCTAGCATAGCTAAAGGGCAGTCTGCTTCTAAAGTGGTTGAACCCCTATTTTTGTTGCTGACAAGACATGAATTTGGGCCTGACGGACAGCACAGTGCATTGCAGGTTTTGGTTAATATCTTGGAACATCCACTATGTCGTGCTGATTATACGTTGACATCTCACCAAGCTATTGAACCACTTATCCCCTTGCTTGATTCTCCGATACCGGCAGTGCAGCAGTTGGCTGCTGAGCTTCTCTCACATCTACTTTTGGAAGAACACCTTCAGAAAGATCCAGCTACACAGCTGGTAATTGGTCCTCTTATTCGAGTTCTTGGCTCTGGTATCCACATATTGCAGCAGAGAGCTGTGAAAGCCCTAGTTAGTCTTGCACTGATATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTGTTGAACTTTCGAAAGTAATATTGCATGCTGACCCTTCACTTCCGCATGCTTTATGGGAATCTGCTGCTTCTGTTTTGTCAAGTATTCTGCAGTTCAGTTCTGAATTCTACTTGGAAGTGCCTATTGCTGTGTTGGTAAGATTGCTTCGTGCTGGTTCAGAGAGCACAGTTATTGGTGCATTAAATGCTCTTCTAGTGTTGGAAAGTGATGATGGCACTAGTGCAGAAGCAATGGCTGAAAGTGGTGCGATAGAGGCTCTCTTAGAGCTTCTAAGGTCTCATCAGTGTGAGGAAACTGCTGCTAGACTACTGGAAGTATTGCTAAACAATGTCAAGATTAGAGAAACAAAAGCTACCAGATCAGCCATTGTGCCGTTATCGCAGTACCTCTTGGACCCACAAACCCAAGGACAGCAGGCAAGGTTACTGGCAATTTTGGCTCTTGGTGATCTATTTCAGAATGAGAGTCTTGCTCGAACAAGTGATGCAGTTTCAGCGTGTCGTGCTTTGGTGAATGTGCTTGAAGATCAGCCAACAGAGGAAATGAAAGTTGTTGCTATATGTGCTCTGCAGAACCTTGTGATGCATAGTCGATCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTACAGGTTGTATTGGATCTGATAGGTTCTAGTGATCCAGAAACATCAGTTCAGGCTGCAATGTTCGTTAAACTTCTCTTCTCTAATAACACAATTCAAGAATATGCTTCAAGTGAAACGGTCAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCTACTGGAAGTGTGAATGATGAGTATCTGAGAGCCTTAAATGCTCTTTTTAGCAACTTCCCACGACTGAGAGCCAGTGAGCCAGCAACACTTAGCATTCCCCATCTGGTTACATCATTGAAAACAGGTTCTGAGGCCACTCAAGAAGCTGCCTTGGACACACTTTTTCTTCTCAGGCAAGCTTGGTCAGCATGTCCGGCAGAAGTCTCAAGAGCTCAGTCAATAGCAGCTGCAGATGCTATTCCTTTGCTACAGTATTTAATCCAGTCTGGTCCTCCTCGGTTTCAAGAGAAGGCTGAATTTCTACTGCAGTGTTTGCCTGGGACATTAGTTGTGATTATAAAACGCGGTAACTACATGAAGCAGTCAGTTGGTAATCCAAGTGTTTACTGTAAGCTTACACTTGGCAACACTCCTCCAAGGCAAACCACGGTGGTCTCAACTGGCCCAAATCCGGAATGGGATGAGAGCTTTTCATGGTCCTTTGAGAGCCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAATGGGAAAGAGTTCATTTGGGAAAGTGACGATCCAAATTGATCGCGTCGTGATGCTCGGATCTGTTGCCGGCGAGTACACTCTACTACCAGAAAGTAAAAGCGGTCCCTCGAGGAATTTAGAGATAGAATTCCAGTGGTCTAACAAGTGA 6450 0.4411 MTTTLAWRFGSNNGGSLAANDMERNGEGNIPDSEPPTPHSVLKMGLRERSSSMEDPDGTLASVAQCIEQLRQSSSSAQEKEYSLRQLSELIDVRENAFSAVGSHSQAVPVLVSLLRSGSVSVKIEAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSADGQVAAAKTIYAVSQGGSKDHVGSKIFSTEGVVPVLWEQLQKGLKTGNVVDGLLTGALKNLSSNTEGFWNATIQAGGVDVLMKLLTAGHPSTLANVCFLLASMMIEDASVCSKVLASEATKQLLKLLGPGNDAPIRAEAAGALKSLSSQCKEARREIANSNGIPALINATIAPSKEFMQGEHAQALQENAMCALANISGGLSYVISSLGQSLESCTSATQIADTLGALASALMIYDSKAEATRTSDPLVVEQTLLKQFKPQSPFLVKERTIEALASLYGNPVLSVKLANSDAKHLLVGLITMAVNEVQDDLLRSLLTLCSNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSTKAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALKSMLSVAPLGDIQREGSAASDAIDTMIKLMSSTKEETQAKSASALAGIFEMRKDVRESSIAVKTLLSAMKLLNVESESIQIESSRCLAAIFLSIKENRDVASVGRDAFLHLITLANSSDLDVVELATCAVANLILDSEISEKAVAEEVIMPATRVLREGTISGKVHAAAAIARLIHSRQVDYSITECVNRAGTVLALVSFLDSAINGSVSTSEAIEALAVLSRLDQNSEHVKPAWAVLAEFPESINPIVLSIAESTPMFQDKAIEILSQLCRDQPVVLGNNVVSANGCLSSLAKRVIGTKNVKVKIGGAALISCAAKVSHQRVLEELNQSNLCVDLVQSLVNMLSSALPLSYQGEGNKEFISIFIHRKEDANGCKSSTGTIISDAKLAIWLLSILACHDEQCKIAIMEAGAIDILTEKISDCYSQYSQIDYKEDSSMWICALLLAVLFQDRDIIRAHATMKSVPAIASLLRSEELDNRYFAAQSIASLVCNGSRGTLLSVANSGAASGLISLLGCADVDIQDLLDLSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFDCADIRRHEAAFGAVTQLVAVLRLGGRGARYSAAKALENLFSADQIRNAETSRQAVQPLVEILNTGLEKEQHAAIATLIRLLSENPSRALAVVDVEMNAVDVLCRILSSNCSLDLKGDAAELCCVLFGNTRIRSSMAAARCVEPLVSLLVSEISAAQHSVVRALDRLVDDEQLAELVAAHGAIIPLVGLLYGRNFLLHEAISRTLVKLGKDRPACKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGQSASKVVEPLFLLLTRHEFGPDGQHSALQVLVNILEHPLCRADYTLTSHQAIEPLIPLLDSPIPAVQQLAAELLSHLLLEEHLQKDPATQLVIGPLIRVLGSGIHILQQRAVKALVSLALIWPNEIAKEGGVVELSKVILHADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRAGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKATRSAIVPLSQYLLDPQTQGQQARLLAILALGDLFQNESLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMHSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWATGSVNDEYLRALNALFSNFPRLRASEPATLSIPHLVTSLKTGSEATQEAALDTLFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNYMKQSVGNPSVYCKLTLGNTPPRQTTVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGSVAGEYTLLPESKSGPSRNLEIEFQWSNK 2149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2267 2149 Gene3D - 48 406 IPR011989 -
Prci4g2267 2149 Gene3D - 407 645 IPR011989 -
Prci4g2267 2149 Gene3D - 819 1167 IPR011989 -
Prci4g2267 2149 Coils Coil 297 324 - -
Prci4g2267 2149 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1194 1238 IPR000225 GO:0005515
Prci4g2267 2149 Gene3D C2 domain 2027 2149 IPR035892 -
Prci4g2267 2149 MobiDBLite consensus disorder prediction 1 39 - -
Prci4g2267 2149 MobiDBLite consensus disorder prediction 1 19 - -
Prci4g2267 2149 Gene3D - 1400 1696 IPR011989 -
Prci4g2267 2149 SUPERFAMILY ARM repeat 655 915 IPR016024 -
Prci4g2267 2149 SUPERFAMILY ARM repeat 1022 1383 IPR016024 -
Prci4g2267 2149 SUPERFAMILY ARM repeat 1616 2026 IPR016024 -
Prci4g2267 2149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2028 2136 IPR035892 -
Prci4g2267 2149 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2028 2149 - -
Prci4g2267 2149 ProSiteProfiles C2 domain profile. 2009 2126 IPR000008 -
Prci4g2267 2149 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 31 2149 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Prci4g2267 2149 Pfam C2 domain 2029 2118 IPR000008 -
Prci4g2267 2149 Gene3D - 1698 1817 IPR011989 -
Prci4g2267 2149 SUPERFAMILY ARM repeat 56 641 IPR016024 -
Prci4g2267 2149 Gene3D - 1818 2026 IPR011989 -
Prci4g2267 2149 SMART arm_5 225 266 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 268 309 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 1728 1767 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 311 360 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 733 771 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 1563 1605 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 1182 1225 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 1855 1895 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 1437 1477 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 817 859 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 1396 1436 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 525 565 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 1227 1268 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 136 176 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 1309 1351 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 567 607 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 1479 1519 IPR000225 GO:0005515
Prci4g2267 2149 SMART arm_5 94 135 IPR000225 GO:0005515
Prci4g2267 2149 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Prci4g2267 2149 Pfam Armadillo/beta-catenin-like repeat 104 134 IPR000225 GO:0005515
Prci4g2267 2149 Gene3D - 646 818 IPR011989 -
Prci4g2267 2149 SMART C2_3c 2029 2125 IPR000008 -
Prci4g2267 2149 SUPERFAMILY ARM repeat 1317 1668 IPR016024 -
Prci4g2267 2149 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1378 1612 - -
Prci4g2267 2149 Gene3D - 1175 1396 IPR011989 -
Prci4g2267 2149 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1823 1866 IPR000225 GO:0005515
Prci4g2267 2149 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
Prci4g2267 2149 CDD C2 2030 2120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2267 Prci-Chr4 35428400 35439255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2267 488 620 U-box Gene Family AT2G23140 40.000 1.30e-11 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2267 - - gmx:100816765 3560.39