Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2260 ATGGCTACTTCGGCTGAGAGGTCCGAGTGGGTGCTCAATACTCCTGAACCTCCCTCTCTCTGGAGTCACTTTTCTGATTCCCTTACCAAAACTTTTACTCAGTGTCGCCAAAAGCTTTCCTCTCTCACTGACCAGCCTGGACCCAAGCCTCTTCTTTCGCTCTTGCAGGCACTTTTCCCTATTCTTCATTGGGGCCGTCACTATACTCTCACTAAATTCAGAAGCGACTTGCTCGCTGGTCTCACTATTGCCAGTCTCTGCATTCCCCAGAGCATTGGGTATGCGACCTTGGCACACCTCGATCCTCAATATGGCCTCTATACAAGTGTCGTGCCTCCACTGATTTATGCTGTAATGGGAAGTTCAAGAGACATAGCAGTTGGACCAGTGGCTGTGGTTTCACTTCTTTTATCTTCCATGGTTCAGAAGCTTATAGATCCTGCTTCTGATTCCCTTGGTTACACCAAGCTTGTTTTGACTACCACGCTCTTTGCTGGCATCTTTCAAGCTGCCTTTGGCCTCTTAAGGTTGGGGTTCCTTGTGGATTTTCTGTCCCACGCTGTTATTGTTGGATTCATGGCGGGAGCCGCCATTGTTATTGGTCTTCAACAGTTGAAGGGACTGTTGGGTATCACTCATTTCACCACCAAGACTGACATCATCTCTGTCCTCAAAGCTGTCTGGAGATCATTCCAAAATCCTTGGAATCCTCGTAATTTCTACCTGGGATCCTCGTTCTTGATCTTCATTCTATCGACCAGATTTGTGGCTAAAAGGAAGAAGAAACTGTTCTGGCTTGCGGCAATCTCACCTCTCGTGTCAGTGATAGTCTCAACTCTGATTGTTTTCGTGACAAGAGCTGACAAGAACGGTGTTAATATTGTGAAACACGTTAAAGGAGGATTGAATCCAAGCTCCATCAATCAGCTAGACTTCAAAAGCCCCTTCATCGCTCAAGTAGCCAAAACTGGACTCGTTGTTGCTCTCGTTGCCCTCACTGAATCTGTTGCTGTTGGTCGATCTTTTGCGTCCTTGAAAGGATACCGTCTTGACGGAAACAAGGAAATGCTGTCTATAGGTCTCACCAACATCATCGGATCTTTTACTTCTTGCTATGTTGCAACTGGTTCGTTCTCTCGGACGGCGGTGAATTACGCGGCGGGATGTGAAACGTTGGTGTCGAACATTGTGATGGGGATTACAGTGTTGATATCGCTGCAATTCTTGACGAAGCTCTTGTATTACACGCCAACTGCGATCCTTGCTTCCATTATTCTCTCTGCTCTTCCAGGACTCATTGATATCTCCGAAGCTTACAAAATCTGGAAGGTTGACAAGCTTGACTCTGTCGCCTCCTCTTTTGCCTTCTTTGGCGTGCTTTTCTCTTCTGTTGAGATCGCTCTCCTCTTAGCGGTGGTAATATCGTTTTTGAAGATCATATGGATTTCAATCAGACCTGGAACAGAAACTCTGGGAAATCTTCCAGGAACTGATTTGTTCTGCGATGTGCATCAGTATCCTATGGCTGTCAAGCCTCCTGGCACTCTAATCGTACGTCTCAAGTCTTCCTTGCTTTGCTTTGCAAATGCCACTTTCGTCAGGGAAAGGATCATCAAATGGGTTGCTCGGGAAGAATTGGAGGACGATAAAGGAAATACCACAAGTACCATTCGGCTCGTGATTGTCGACATCTCCAATTTGGTGAACATTGATACATCTGGAATTGCTTGTCTGGAGGAACTCCATCAAAGTTTGGTGTCACAGGGGAAGGAGTTAGCAATTGCGAGCCCTACATGGGAAGTGATCCACAAGCTAAAGGCGGCCAACTTTGTGAGCAAAATTGGTGGAAGGGTGTTCTTGACTGTTGGCGAAGCTATTGGATGCAAATCCGACTTTTAA 1899 0.4634 MATSAERSEWVLNTPEPPSLWSHFSDSLTKTFTQCRQKLSSLTDQPGPKPLLSLLQALFPILHWGRHYTLTKFRSDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGSSRDIAVGPVAVVSLLLSSMVQKLIDPASDSLGYTKLVLTTTLFAGIFQAAFGLLRLGFLVDFLSHAVIVGFMAGAAIVIGLQQLKGLLGITHFTTKTDIISVLKAVWRSFQNPWNPRNFYLGSSFLIFILSTRFVAKRKKKLFWLAAISPLVSVIVSTLIVFVTRADKNGVNIVKHVKGGLNPSSINQLDFKSPFIAQVAKTGLVVALVALTESVAVGRSFASLKGYRLDGNKEMLSIGLTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMGITVLISLQFLTKLLYYTPTAILASIILSALPGLIDISEAYKIWKVDKLDSVASSFAFFGVLFSSVEIALLLAVVISFLKIIWISIRPGTETLGNLPGTDLFCDVHQYPMAVKPPGTLIVRLKSSLLCFANATFVRERIIKWVAREELEDDKGNTTSTIRLVIVDISNLVNIDTSGIACLEELHQSLVSQGKELAIASPTWEVIHKLKAANFVSKIGGRVFLTVGEAIGCKSDF 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2260 632 PANTHER SULFATE TRANSPORTER 27 627 IPR001902 GO:0016020|GO:0055085
Prci4g2260 632 Pfam STAS domain 506 625 IPR002645 -
Prci4g2260 632 ProSitePatterns SLC26A transporters signature. 102 123 IPR018045 GO:0008271|GO:0008272
Prci4g2260 632 NCBIfam sulfate permease 60 619 IPR001902 GO:0016020|GO:0055085
Prci4g2260 632 FunFam Sulfate transporter 31 485 631 - -
Prci4g2260 632 Gene3D STAS domain 485 630 IPR036513 -
Prci4g2260 632 Pfam Sulfate permease family 73 451 IPR011547 GO:0016020
Prci4g2260 632 CDD STAS_SulP_like_sulfate_transporter 506 620 - -
Prci4g2260 632 ProSiteProfiles STAS domain profile. 525 629 IPR002645 -
Prci4g2260 632 SUPERFAMILY SpoIIaa-like 510 626 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2260 Prci-Chr4 35345794 35350178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2260 6 626 Inorganic Solute Cotransporters AT5G10180 67.846 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2260 K17469 - gmx:100781327 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2260 4 35345794 35350178 Prci4g2260 4 35345794 35350178 ECH