Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2249 ATGCTTCATATCACCAACATGATGCCAGATTTGTCAGATCCATGTACCCAAGAGTTGATGAAAGCTCTCCAACCACTTATCACCACCACTCCTTCCTCTTCTCCTCCTCCTCTCCTCCATGATTCCTCCATCTCCACCACTCCGATCAGGCTCAACCACCTCACTCAATCTCAGATTCATCAAATTCAGACCCAATTCCACTACAACACGCCTCGCCATATCGCATCACCTTCACTGCAACGTCGCCGTTTAAAGGGTAATCCTCCAAAACCGGCAAAACTCTACCGAGGAGTCAGACAGCGACATTGGGGCAAATGGGTCGCCGAGATCCGATTGCCCAAGAACCGTACTCGACTCTGGCTCGGCACCTTCCATACTGCAGAGGAGGCTGCTTTCGCTTACGACAGCGCCGCCCATAAGCTCAGAGGAGACTTTGCTCGGCTCAATTTCCCTCACTTACGCCACCATGGAGCTCATGTGTTTGGTGAATTCGGTGCCTACAAGCCTCTTCCCTCGGCTGTGGACGCCAAGCTCCGAGCTATTTGTGAAAGCTTAGCAGAGACAGAGACTTCCCAGAAACAGAGCATTAATAATAATGCAGAGAAGCCTCAGAACGATCATGAATCTTGTACTCTTTCCAACTTAGCCTCGTCGTCCGATGAATCGGAGATTACTTACTTGGATTTCTCCGATTCTAAAGTGGATGAAACAGAGGTTGTCGGTTTGGACAGATATCCTTCCGTTGAGATTGATTGGTCTGCTATCTGA 768 0.4935 MLHITNMMPDLSDPCTQELMKALQPLITTTPSSSPPPLLHDSSISTTPIRLNHLTQSQIHQIQTQFHYNTPRHIASPSLQRRRLKGNPPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFHTAEEAAFAYDSAAHKLRGDFARLNFPHLRHHGAHVFGEFGAYKPLPSAVDAKLRAICESLAETETSQKQSINNNAEKPQNDHESCTLSNLASSSDESEITYLDFSDSKVDETEVVGLDRYPSVEIDWSAI 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2249 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 29 255 - -
Prci4g2249 255 SUPERFAMILY DNA-binding domain 94 152 IPR016177 GO:0003677
Prci4g2249 255 MobiDBLite consensus disorder prediction 189 216 - -
Prci4g2249 255 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Prci4g2249 255 CDD AP2 93 153 IPR001471 GO:0003700|GO:0006355
Prci4g2249 255 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Prci4g2249 255 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Prci4g2249 255 Pfam AP2 domain 95 143 IPR001471 GO:0003700|GO:0006355
Prci4g2249 255 FunFam Ethylene-responsive transcription factor 2 93 152 - -
Prci4g2249 255 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Prci4g2249 255 Gene3D AP2/ERF domain 94 152 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2249 Prci-Chr4 35109070 35110272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2249 6 255 AP2-EREBP Transcription Factor Family AT4G39780 50.000 1.58e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci4g2249 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2249 K09286 - gmx:100797648 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2249 4 35109070 35110272 Prci4g2249 4 35109070 35110272 ECH