Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2247 ATGACGCAGCAGAATATGGTGATCTCTGATGCCAAGTCCAGACTCAACTTGACCTTCACCGCCGCCGTCTCAAACTCGTTCAATTTCACCACCGCTCCTCACAAGCCCCCCGCCCCTCCCGGAGCCGGCGCCAGCGGCTTCATCTCCATTTCAAGGAACAAGTTCTTGAAGACCCTCGACATCAATGGAGCCGCCAAAGTCAACTCCTGGGTTGACTCCATGCGAGCCTCTTCCCCAACCCACCACTCCAATAATCATCTCACCGCCCCTGCTTTCGACCCAGAAGAAAATTCTTGGATCCTTCGTCACCCATCTGCATTAGATATGTTTGAGCAAATCATCGATGCTTCCAGAGGAAAGCAAATAGTCGTGTTTCTCGACTACGACGGTACGCTCTCGCCCATCATCGAAGACCCTGATCGTGCTTTCATGTCCGATGCGATGAGGAAGACGGTGAGAAACCTTGCGAGGTGCTTTCCGACAGCTATAGTCAGCGGCAGATGCAGAGACAAGGTGTACAACTTTGTCCGTTTGGCAGAGTTGTATTATGCTGGAAGTCATGGGATGGATATCAAAGGCCCGACTAAAATCTCTAAATACAATAGAGACAGCAAAGCGATCCTGTTTCAGCCTGCCTGTGAATTTTTACCCATGATAAACAAGGTTTATCAACTGTTGCTTGAGAAAACAAGCTCAATTGCAGGAGCTAAGGTGGAGAACAACAAGTTCTGTGTATCTGTTCATTTTCGATGTGTTGAAGAAAAGAAATGGAGCCAACTGGCAAACCAAGTCAGATCAGTGTTAAAGGAGTACCCCAAGCTTCGCCTCACTCAAGGAAGGAAGGTACTAGAGATTCGTCCCCCGATTAAATGGGACAAAGGAGAGGCCTTGGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTACCGACGTGTTCCCTGTTTACATTGGAGACGATCGATCCGATGAAGATGCATTCAAGAAACTTAGAGCGAGAGGACAAGGCTATGGCATTCTTGTCTCCAAATTTCCTAAAGATACTAGTGCATCTTTCTCCTTACAAGAACCCGACGAGGTGATGGAATTTCTTCAGCGATTAGTGGAGTGGAAAAGAGTTTGTCTAGGAGCACGTTCGAGGGTGTAA 1146 0.4764 MTQQNMVISDAKSRLNLTFTAAVSNSFNFTTAPHKPPAPPGAGASGFISISRNKFLKTLDINGAAKVNSWVDSMRASSPTHHSNNHLTAPAFDPEENSWILRHPSALDMFEQIIDASRGKQIVVFLDYDGTLSPIIEDPDRAFMSDAMRKTVRNLARCFPTAIVSGRCRDKVYNFVRLAELYYAGSHGMDIKGPTKISKYNRDSKAILFQPACEFLPMINKVYQLLLEKTSSIAGAKVENNKFCVSVHFRCVEEKKWSQLANQVRSVLKEYPKLRLTQGRKVLEIRPPIKWDKGEALEFLLESLGFANCTDVFPVYIGDDRSDEDAFKKLRARGQGYGILVSKFPKDTSASFSLQEPDEVMEFLQRLVEWKRVCLGARSRV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2247 381 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 44 373 IPR044651 GO:0004805|GO:0005992
Prci4g2247 381 FunFam Trehalose 6-phosphate phosphatase 122 207 - -
Prci4g2247 381 Pfam Trehalose-phosphatase 125 357 IPR003337 GO:0003824|GO:0005992
Prci4g2247 381 Gene3D - 122 206 IPR023214 -
Prci4g2247 381 Gene3D - 223 375 IPR023214 -
Prci4g2247 381 NCBIfam trehalose-phosphatase 120 368 IPR003337 GO:0003824|GO:0005992
Prci4g2247 381 NCBIfam HAD-IIB family hydrolase 124 331 IPR006379 -
Prci4g2247 381 CDD HAD_TPP 123 362 - -
Prci4g2247 381 SUPERFAMILY HAD-like 123 371 IPR036412 -
Prci4g2247 381 FunFam Trehalose 6-phosphate phosphatase 218 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2247 Prci-Chr4 35073940 35076904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2247 111 367 Trehalose Biosynthesis Gene Families AT1G70290 26.259 1.05e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2247 K01087 - gmx:100815357 566.614