Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2236 ATGTGTGGAATACTTGCAGTTTTGGGATGCATTGACAACTCTCAGGCCAAGCGTTCTCGTATAATCGAATTGTCTAGGAGATTACGGCATCGGGGTCCTGACTGGAGTGGTTTGCATTTCCACGAAAACTGTTATCTTGCCCATCAACGGTTGGCCATTGTCGATCCTACCTCAGGGGATCAACCTCTATACAATGAAGACAAGACTGTTGTTGTTACTGTAAATGGGGAGATATACAACCATAAAGAATTGAGAAAAAAACTGACTTCTCATCAATTTCGCACTGGAAGTGACTGTGAAGTGATTGCTCACCTTTATGAAGAATATGGTGAAGACTTTGTTGACATGTTGGATGGCATGTTCTCTTTTGTCCTTCTAGACACTAGAGACAATCGCTTCATTGCAGCTCGTGATGGTATTGGGATTACCCCTCTTTACATGGGCTGGGGTCTTGATGGATCTATATGGTTTGCATCTGAAATGAAAGCTTTGAGTGATGATTGTGAGAGATTCATATCTTTTCCTCCTGGGCATTTATATTCCAGCAAACAGGGAGACCTAAGAAGGTGGTATAACCCACCCTGGTTCCCCGAGAACATTCCATTAACTCCATACAATCCTATGGTTTTACGTGAGGCATTTGAGAAGGCCGTTGTTAAGAGACTTATGACTGATGTACCATTTGGAGTTCTATTGTCTGGAGGACTGGATTCATCACTGGTTGCTGCTGTTGCCAACCGTCATTTGGCTGAATCTGAAGCTGCTCGTCAGTGGGGATCACAGTTACATACCTTTTCTGTTGGTTTGGAGGGTTCACCAGATTTGAAAGCTGCCAGAGAGGTTGCAGATTATATTGGGACTCGTCACCATGAATTTCATTTCACTGTTCAGGAAGGAATAGATGCGCTTGAGGAAGTCATTTACCATATAGAAACATATGATGTAACAACCATCAGAGCAAGCACTCCTATGTTCCTTATGTCTCGAAAAATTAAATCCTTGGGAGTGAAGATGGTCCTTTCTGGGGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTACTTCCACAAGGCACCTAACAAGGAAGAGTTTCACCAAGAAACATGTAGAAAAATTAAAGCACTACATCTTTATGACTGCCTGAGAGCCAACAAAGCAACTTCAGCATGGGGTTTAGAGGCGCGTGTACCATTCCTAGATAAAGAATTCATTAACATAGCCATGAGCATAGATCCAGAGTGGAAAATGGTAAGGGCTGATCTTGGAAGGATAGAGAAGTGGGTTCTACGCAACGCATTTGATGATGATCAAAAACCATATTTACCAAAGCACATATTATATAGGCAGAAGGAACAGTTCAGTGACGGTGTTGGGTACAGCTGGATTGATGGCTTGAAGGAGCATGCCAACAAACAAGTCACGGATGCAATGTTGATGAATGCAAGTTTTGTTTACCCAGAAAACACTCCTAACACGAAAGAAGCATACTTCTACAGAACAATTTTTGAAAAGTTCTTCCCCAAGAACGCTGCTAGGTCAACAGTTCCAGGAGGCCCCAGTGTGGCATGTAGTACTGCAAAAGCTGTGGAATGGGATGCATCTTGGTCAAAAAATCTAGACCCGTCTGGTCGTGCCGCACTTGGCGTTCATGAAGCAGCATACGAGGAAGCAAGAGTTGCCAAACCTATCAATGGTGCCCACTGA 1704 0.4325 MCGILAVLGCIDNSQAKRSRIIELSRRLRHRGPDWSGLHFHENCYLAHQRLAIVDPTSGDQPLYNEDKTVVVTVNGEIYNHKELRKKLTSHQFRTGSDCEVIAHLYEEYGEDFVDMLDGMFSFVLLDTRDNRFIAARDGIGITPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHLYSSKQGDLRRWYNPPWFPENIPLTPYNPMVLREAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVANRHLAESEAARQWGSQLHTFSVGLEGSPDLKAAREVADYIGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKATSAWGLEARVPFLDKEFINIAMSIDPEWKMVRADLGRIEKWVLRNAFDDDQKPYLPKHILYRQKEQFSDGVGYSWIDGLKEHANKQVTDAMLMNASFVYPENTPNTKEAYFYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDASWSKNLDPSGRAALGVHEAAYEEARVAKPINGAH 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2236 567 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Prci4g2236 567 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Prci4g2236 567 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 210 483 - -
Prci4g2236 567 PIRSF Asn_synthetase_glu-h 356 517 IPR006426 GO:0004066|GO:0006529
Prci4g2236 567 PIRSF Asn_synthetase_glu-h 1 360 IPR006426 GO:0004066|GO:0006529
Prci4g2236 567 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Prci4g2236 567 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 3 192 IPR029055 -
Prci4g2236 567 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Prci4g2236 567 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Prci4g2236 567 PANTHER ASPARAGINE SYNTHETASE 1 555 - -
Prci4g2236 567 Gene3D HUPs 198 514 IPR014729 -
Prci4g2236 567 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 192 - -
Prci4g2236 567 FunFam Asparagine synthetase [glutamine-hydrolyzing] 195 514 - -
Prci4g2236 567 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2236 Prci-Chr4 34956427 34962255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2236 61 164 PRT Gene Family AT4G38880 33.621 6.01e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2236 K01953 - qsa:O6P43_023205 1060.06