Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2210 ATGGAGGAGGAAGAGCATGAGGTGTACGGAGGCGATATCCCGGACATGGCGGAGATGGAAGGAGACATGGATTCTCACCATGCCGATGTCGATATGTCTGCTGCTGACGACGATGCCGTCAAGGAACTGGACGAGATGAAGAAGAGATTGAAGGAAATGGAAGAGGAAGCGGCAGCTCTCCGTGAAATGCAAGCCAAGGTCGAGAAGGAGATGGGTGCAGTTCAAGATCCTGGAAGTGCAGCTGCGTCTCAGGCAAGCAAGGAGGAGGCAGATTCTCGATCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCCGAAGAAGTTCAGCAACACTTCCAATCATGTGGGACAGTGAATAGGGTGACTATTCTTACAGACAAGTTTGGTCATCCAAAAGGTTTTGCTTATGTGGAATTCCTGGAACCTGAAGCTGTCCAGGAGGCTATTGTCTTGAATGAATCTGAGTTGCATGGTCGTCAATTGAAGGTTATGCCAAAGAGGACCAATGTCCCTGGAATGAAACAGTATCGCCCCGGCCGTTTCACTCCTTACATGCCGTATCGCTTCAGGAGGCCATTCCCTTCGCCTTACTTTTACTCACCTTATGGATATGGGAAGGTTCCCAGGTTCAGAAGACCAACTCGGTACATGCCATATTATTAG 666 0.488 MEEEEHEVYGGDIPDMAEMEGDMDSHHADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPGSAAASQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEAIVLNESELHGRQLKVMPKRTNVPGMKQYRPGRFTPYMPYRFRRPFPSPYFYSPYGYGKVPRFRRPTRYMPYY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2210 221 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 24 175 - -
Prci4g2210 221 MobiDBLite consensus disorder prediction 68 92 - -
Prci4g2210 221 SUPERFAMILY RNA-binding domain, RBD 84 189 IPR035979 GO:0003676
Prci4g2210 221 Gene3D - 28 165 IPR012677 -
Prci4g2210 221 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 93 169 IPR000504 GO:0003723
Prci4g2210 221 MobiDBLite consensus disorder prediction 1 20 - -
Prci4g2210 221 Coils Coil 36 70 - -
Prci4g2210 221 SMART rrm1_1 94 165 IPR000504 GO:0003723
Prci4g2210 221 FunFam Polyadenylate-binding protein 1 32 165 - -
Prci4g2210 221 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 163 IPR000504 GO:0003723
Prci4g2210 221 CDD RRM_II_PABPs 94 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2210 Prci-Chr4 34604194 34614327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2210 90 164 Eukaryotic Initiation Factors Gene Family AT2G36660 35.526 2.94e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2210 K14396 - jre:109014561 337.035