Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2209 ATGGAGGAGGAAGAGCATGAGGTGTACGGAGGCGATATCCCGGACATGGCGGAGATGGAAGGAGACATGGATTCTCACCATGCCGATGTCGATATGTCTGCTGCTGACGACGATGCCGTCAAGGAACTGGACGAGATGAAGAAGAGATTGAAGGAAATGGAAGAGGAAGCGGCAGCTCTCCGTGAAATGCAAGCCAAGGTCGAGAAGGAGATGGGTGCAGTTCAAGATCCTGGAAGTGCAGCTGCGTCTCAGGCAAGCAAGGAGGAGGCAGATTCTCGATCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCCGAAGAAGTTCAGCAACACTTCCAATCATGTGGGACAGTGAATAGGGTGACTATTCTTACAGACAAGTTTGGTCATCCAAAAGGTTTTGCTTATGTGGAATTCCTGGAACCTGAAGCTGTCCAGGAGGCTATTGTCTTGAATGAATCTGAGTTGCATGGTCGTCAATTGAAGGTTATGCCAAAGAGGACCAATGTCCCTGGAATGAAACAGTATCGCCCCGGCCGTTTCACTCCTTACATGCCGTATCGCTTCAGGAGGCCATTCCCTTCGCCTTACTTTTACTCACCTTATGGATATGGCTCTCGTCACACCTCAAATGCTGGTTTTTCATCAATTAATGAAGCCTTTTATGCCACTCCTAAGACTGTTGTAGATGAATCTTGGTATTTGGACAAAGGGGCAACAACTCACGTGACCAATGATGCTTCTCGTTTGAACAACTCAGTCCCTAATGGTGGAAGGTTCCCAGGTTCAGAAGACCAACTCGGTACATGCCATATTATTAGAAGTCAGTGTGCAATGATGTTACAGTTATGA 855 0.4713 MEEEEHEVYGGDIPDMAEMEGDMDSHHADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPGSAAASQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEAIVLNESELHGRQLKVMPKRTNVPGMKQYRPGRFTPYMPYRFRRPFPSPYFYSPYGYGSRHTSNAGFSSINEAFYATPKTVVDESWYLDKGATTHVTNDASRLNNSVPNGGRFPGSEDQLGTCHIIRSQCAMMLQL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2209 284 Gene3D - 29 165 IPR012677 -
Prci4g2209 284 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 163 IPR000504 GO:0003723
Prci4g2209 284 MobiDBLite consensus disorder prediction 68 92 - -
Prci4g2209 284 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 93 169 IPR000504 GO:0003723
Prci4g2209 284 MobiDBLite consensus disorder prediction 1 20 - -
Prci4g2209 284 Coils Coil 36 70 - -
Prci4g2209 284 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 24 175 - -
Prci4g2209 284 SMART rrm1_1 94 165 IPR000504 GO:0003723
Prci4g2209 284 SUPERFAMILY RNA-binding domain, RBD 84 189 IPR035979 GO:0003676
Prci4g2209 284 FunFam Polyadenylate-binding protein 1 32 165 - -
Prci4g2209 284 CDD RRM_II_PABPs 94 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2209 Prci-Chr4 34604194 34614327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2209 90 164 Eukaryotic Initiation Factors Gene Family AT2G36660 35.526 1.01e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2209 K14396 - mof:131159584 308.145