Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2205 ATGGAACGGTATGAGATTATTAAAGATATTGGGTCTGGAAATTTCGGTGTTGCCAAGCTGGTCAGAGAGAAACGAACCGGCGAGTTCTTCGCCGTCAAGTTCATTGAGAGAGGCTGCAAGATTGACGAGCATGTACAAAGGGAGATCACAAACCATAGATCCTTGAAACATCCTAATATCATTCGATTTAAGGAGGTTTTGCTGACTCCAACTCATTTAGCCATAGTCATGGAATATGCTGCTGGGGGAGAACTTTTTGAAAGAATATGTAATGCGGGAAGATTCAGTGAGGACGAGGCAAGATACTTCTTTCAACAATTGATCTCTGGCGTGAGCTATTGCCATTCCATGGAAATCTGTCACAGAGATCTCAAGCTTGAAAATACACTGTTAGATGGAAGCCCAGCACCAAGACTCAAGATATGTGACTTCGGTTACTCAAAGGCAAGGATTAATTTACTTATTTCATCTCTTAATCTTATCGATGAGACTCAATTATTAAGTTTTGTTCTGTCACAATCTTGTTTCTTTATGCAGTCTTCTGTTCTGCACTCTCAGCCTAAATCTACAGTTGGCACACCTGCATATATTGCCCCAGAAGTATTGTCAAGAAAGGAATACGATGGAAAGGTTGCGGATGTTTGGTCTTGTGGGGTGACTTTATATGTGATGCTTGTTGGTGCTTATCCTTTTGAAGATCCAGAAGACCCAAGAAACTTCAGAAAAACACTTCAGAGAATCCTTAGCGTCCACTATTCTATTCCAAATTACGTTCGTGTCTCCCAAGAATGCCGACACCTTTTATCCAGAATATTTGTGGCCAACCCTGAAAAGAGAATAACGATCCCAGAAATAAAAAAACATCCATGGTTTGTGTATAACTTGCCAATAGAGTTCATGAACGAAGAAGGGGATAGTGGTGACGAGAGGAACATGGAAGCATGTCAGAGCTTAGAAGAAATACTGTCAATAATTCAAGAGGCTAGAAAAGCAGCAGATAATGGTCCTAATAAAGTTGGAGACCACTTTGTTGATGGAAGCATGGATCTTGATGATATCGACGCCGATGCTGACATTGATGATGTTGACACCAGCGGTGATTTTGTCTGTGCCTTGTAG 1119 0.4111 MERYEIIKDIGSGNFGVAKLVREKRTGEFFAVKFIERGCKIDEHVQREITNHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPAPRLKICDFGYSKARINLLISSLNLIDETQLLSFVLSQSCFFMQSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPNYVRVSQECRHLLSRIFVANPEKRITIPEIKKHPWFVYNLPIEFMNEEGDSGDERNMEACQSLEEILSIIQEARKAADNGPNKVGDHFVDGSMDLDDIDADADIDDVDTSGDFVCAL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2205 372 FunFam Serine/threonine-protein kinase SAPK2 1 79 - -
Prci4g2205 372 SMART serkin_6 4 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2205 372 ProSiteProfiles Protein kinase domain profile. 4 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2205 372 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Prci4g2205 372 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Prci4g2205 372 PANTHER SERINE/THREONINE KINASE 2 308 - -
Prci4g2205 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Prci4g2205 372 SUPERFAMILY Protein kinase-like (PK-like) 1 294 IPR011009 -
Prci4g2205 372 Gene3D Transferase(Phosphotransferase) domain 1 80 296 - -
Prci4g2205 372 Pfam Protein kinase domain 4 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2205 372 CDD STKc_SnRK2 3 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2205 Prci-Chr4 34562580 34566150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2205 3 303 CBL-interacting serine-threonine protein kinases AT4G24400 39.542 1.06e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Prci4g2205 Pkinase 6.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2205 K14498 - zju:107425296 565.459