Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2204 ATGATTGTTCAAACTTCTTGGTCCCTTCTGAAGAAGTCTCAGGATCTACTTTGGATCTTGGAGAAAGGCCTTCGGAGATGTGGCAAGAGTTGCCGTCTACGGTGGCTCAATTACCCAAGGCCAGACATCAAACACGGAGGTTTCCCTGAAGAAGAGGACAACATTATTTTTACCCTTTATGGGCAAATGGGAAGCAGATGGTCGGCCATAGCCTCTCAGCTTCCTGTTAGAACAGACAATGATGTGAAAAACTACTGGAACACCAAGTTGAAGAAGAAGCTAATGGCAGGAAAAGTGAACCTCAAAACAATGACAGACAGTCGCATTAATCTTCCTTCGACCCCATTACTGACTCACAATGTTCAGACTCAAAGCCAAAATTCAGATTTTCCTGCTCCTCAAAACCAGAGTTCATCTCCCAGCTCAACTCTGCCCATCCTGACCGATGCAAATTCTGGGTTTTACATTAACACTCACACCATGATCAGTTTCGATCCGACTCAATTATACAGTCCGAGTTTCATGGATATCTCAGAAATTAATAACGCAAGCTCAAGTATGATGGCCTTGTCTCAGGAAGGTTCAAGAATTTCAGATTCATCTTTGATTGCAATGGATAACAAGTGTTTGTCGCTGCCAGATCATGCCGGCGACGAAGCTACCCAAGTATTAATGAATTTTGGGTATGGATTTCCCTCTGACGTTGTGAATAATGGATTTTACTCCCAAGAGAAAATTGGTGAATTCGCTTCAATTTTCTATACTCATGAGTTGGTTGCATTCGAAATACTATTGTTTTCCTACGGTACCATTTGA 816 0.4228 MIVQTSWSLLKKSQDLLWILEKGLRRCGKSCRLRWLNYPRPDIKHGGFPEEEDNIIFTLYGQMGSRWSAIASQLPVRTDNDVKNYWNTKLKKKLMAGKVNLKTMTDSRINLPSTPLLTHNVQTQSQNSDFPAPQNQSSSPSSTLPILTDANSGFYINTHTMISFDPTQLYSPSFMDISEINNASSSMMALSQEGSRISDSSLIAMDNKCLSLPDHAGDEATQVLMNFGYGFPSDVVNNGFYSQEKIGEFASIFYTHELVAFEILLFSYGTI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2204 271 Gene3D - 4 44 - -
Prci4g2204 271 PANTHER OS09G0431300 PROTEIN 22 184 - -
Prci4g2204 271 ProSiteProfiles Myb-like domain profile. 40 90 IPR001005 -
Prci4g2204 271 SUPERFAMILY Homeodomain-like 24 96 IPR009057 -
Prci4g2204 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 94 IPR017930 -
Prci4g2204 271 Pfam Myb-like DNA-binding domain 49 88 IPR001005 -
Prci4g2204 271 SMART sant 44 92 IPR001005 -
Prci4g2204 271 CDD SANT 48 90 IPR001005 -
Prci4g2204 271 MobiDBLite consensus disorder prediction 123 144 - -
Prci4g2204 271 Gene3D - 47 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2204 Prci-Chr4 34541405 34554341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2204 23 95 MYB Transcription Factor Family AT5G65790 80.822 5.90e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci4g2204 Myb_DNA-binding 9.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2204 K09422 - qsa:O6P43_015936 252.292