Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2189 ATGACTTGTGGACGAAAATGCAGTCCAATCCCTTCCCCTCTTCAGTCGCCGATGTTGCTTCCAGAGCCCGCTTCGCCATTTCTTTCCTCCAATATTCATAGCCTTGGTCAAATCCATCTTCTTCGAGTCGTGATGGCCGCCATAGCTTCCATACTTGGCATGCTTCTCCTTCTTTTCGTGGTGCTCAAATTTTTGGCAAGGTACTGTGCGAGGAGATATTACAATAGGAGAAGTAACTCACCGATATTGTTTGATATTCGCGGAGATTCTTCGTTTTCCGATGATGATGGAGCTCCAGTTATGCATCCGATCTGGTTCATCAACACCGTGGGTCTCCAGCAATCTGTCATAGATTCAATCGCAGTCTTCAAATACAGAAAAGACGATGGATTAGTGGAAGGAACAGAGTGTTCTGTATGTTTAGGCGAATTTCAAGAAGATGAGAGCCTCCGACTCTTACCCAAGTGCAGTCACGCTTTTCACGTTCAATGCATCGATACGTGGTTGAGATCGCGTAAGAATTGCCCCTTGTGTCGTGCTCCTATAGTTCGCGAAACTTCCGGAAGAGAGATAAGCGCCGTGATTGCGCCTGAACACAACGTCGCCAGCGAGATCCATGCAGAGAATTTGGATGGTTCTGGTGGGGTAGACGGTTCTCCTGTCGGAGAAGGCGAGAGCAGTCAATTGAGCCCTGAAGATGATGATTCTGGAATTGTGCCTGCTGAAGATGAACAAGATGGTGAAGTTTCAGATAAAAATTTGGGTCCTTCAGACAAGATGATGAATTGCCACAATGAGAGGGTGAGCAGGTCAGTTTCAGCACATTCTTATCCTTCTACCTTTGAAGCATCAACTCAGGAGCTTAATTCGTATTCTCTACGCTCCTTTTAA 891 0.4624 MTCGRKCSPIPSPLQSPMLLPEPASPFLSSNIHSLGQIHLLRVVMAAIASILGMLLLLFVVLKFLARYCARRYYNRRSNSPILFDIRGDSSFSDDDGAPVMHPIWFINTVGLQQSVIDSIAVFKYRKDDGLVEGTECSVCLGEFQEDESLRLLPKCSHAFHVQCIDTWLRSRKNCPLCRAPIVRETSGREISAVIAPEHNVASEIHAENLDGSGGVDGSPVGEGESSQLSPEDDDSGIVPAEDEQDGEVSDKNLGPSDKMMNCHNERVSRSVSAHSYPSTFEASTQELNSYSLRSF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2189 296 CDD RING-H2_EL5-like 136 179 - -
Prci4g2189 296 MobiDBLite consensus disorder prediction 209 296 - -
Prci4g2189 296 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Prci4g2189 296 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 43 186 IPR044675 -
Prci4g2189 296 SMART ring_2 137 178 IPR001841 -
Prci4g2189 296 MobiDBLite consensus disorder prediction 266 296 - -
Prci4g2189 296 FunFam RING-H2 finger protein ATL54 112 185 - -
Prci4g2189 296 Pfam Ring finger domain 136 179 IPR001841 -
Prci4g2189 296 SMART FANCL_C_2 133 186 - -
Prci4g2189 296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 187 IPR013083 -
Prci4g2189 296 SUPERFAMILY RING/U-box 117 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2189 Prci-Chr4 34323284 34324887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2189 94 228 C3H Transcription Factor Family AT4G33565 53.103 6.10e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2189 - - pcin:129308680 565.459