Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2188 ATGCTTCCGCGTTCTATCAGACAAACCCTCATCCAAAAATCCAATGCTCCTAGCAAACGCTTTCCGCAATCCGTTTTGGGACTTTTCCGCCGCCTCTTCTCTGCAACTGCAAAGAAAGCTGATGGGGGCTCGAGGACGGAGGAAGAAGAAAGAGTTTACTCGTGGTTATATACTTTGGCTCGCTCTGAAAGAAACTTGGTCTTTGAGTACGTTCGTTCCACTGAAAGAGGGTTAAGTTTCACTGAGGCAGATAGGAGACTGAAGGAAACTGGACCAAATGTTCTGCACGAGCATACTTTTCCTAGATGGTGGCATCTTCTATGGAGTGCACTTTTTCATCCTTTCAATATCATTCTGGTTGTCTTGTCTATCTTGTCCTTCATATCCGGTGACATTCCAAATGGCTGCATCATGCTAACGCTTGTTTTTATCAGTGTCTCCCTTCGTTTCTATCAGGAGTACAGCAGTTCAAAAGCAGCTATGAAGCTTTCAGAATTTCTAAGATCCCCAATAAAAGTTCAAAGATGCGCGGGTAGAGTTGTGCAACAAGAGTTAGTAGTTCAAGTTGATCAAAGGGATATAGTTCCTGGTGACATTGTGATTTTTGAACCTGGGGATCTCTTTCCTGGAGATGTCAGATTGTTATCTTCCAAAAACCTTGTTGTAAGTCAGGCCTCACTAACTGGGGAATCTTGGGCGACTGACAAAACTGCTGATGTCAGAGAAAGTCTCAGCACTCCTTTGTTAGATTTAAAGAACATTTGTTTCATGGGCACAAACGTGGTATCTGGAAGTGGGACAGGCCTAGTTATATCAACTGGATCTAACACATACATGAACACCATGTTCTCAAAAATTGGGAAGAAGCCACCAGATGAATTTGAATATGGTCTACGCTGGATATTTTTTGTGCTTGTGGCTATTATGCTAGTTGCAGTGACTGTCATATTTGTAACAGATTACTCAACCTCTGGTGATTTGAGCACAAGTATTATTTTTGCCATCTCTGTGGCATCTGCCCTCACTCCTCAAATGCTTCTCCTCATCATCAACACTTGCCTTGCAAAAGGAGCACTCGCCATGGCTCGAGACCGATGTATAGTCAAAAGTTTAGCATCAATACGCAACATGGGATCAATGGACATCCTTTGCATTGACAAGACAGGTACACTGACAATGAACCGTGCAATTATGGTAAATCATCTTGACTGCCAGGGGATAACTCAAGAAAAAGTTCTACGCTTTGCATTCCTCAATTCTTACTTTAAGACAGATCAGAAGTATCCTCTGGATGATGCCATTCTGGCCTTCGTATATTCAAATGGATTCAGATTTCAGCCGTCAAAATGGATGAAAATAGATGAGATTCCTTTTGATTTCATACGCAGGCGAGTATCTGTCATCATAGAAACAGAGTCGCGTATGGAAGACAGAGAGTCTCAGTTATCTGGCAGGTTTATGGTAACAAAAGGGGCATTGGAGGAAGTCATGAGAGTTTGTTCTTTCATTGAGAATTTTAATAACAATGAAGTTTCCAAGTTCTCTTCAGATGATTATAACAGAATTTTATCCTTAGCGGAAGGATTGAGCAATGAAGGACTAAGAATTATAGGAGTAGCTATAAAAAAGCTAGAAAAGCAAACCAGTGAAACAAGCACCAGAAGTAGGAGCAGTAAAGAAAATGTTGAAACGGACATGGTGTTCCTTGGTGTCATTACGTTCTATGACCCTCCGAAGGACTCAGCAGAGCAAGCACTGTGGCGCTTAGCAGAGAAGGGAGTGAAAGCAAAAGTTTTGACAGGTGACTCACTGTCCTTAACCATGAGGGTATGCAGGGAAGTAGGCATCAGAACAACCCACGTAATCACGGGGCCTGAGCTAGACCAACTAGACCAAGAAACTTTCCATGAAACTGTTAAGAGAGCCACAGTCCTAGCTAGGCTCACACCAATTCAGAAACTACGTATAGTCCAGTCCTTACAGACAGTTGGAAACCACGTTGTTGGGTTCTTGGGAGATGGTATCAACGATTCACTAGCCCTTGATGCTGCCAATGTCAGCATTTCAGTGGACTCAGGTGTAGCAATTGCCAAAGATATGGCAGATATTATATTGCTTGAGAAAGATCTTAATGTTCTAGTGGCAGGTGTAGAACATGGTAGACTCACTTTTGGAAACACAATGAAGTACATTAAAACGTCAGTTATTGGTAACTTAGGAGGCGTGCTTTCGCTGCTTGTAGCGACCTTGATGCTTAAATTTGAGCCTGTGACTTCAAGGCAGCTTCTTACTCAGAATTTCCTGTATAGTGTAGGACAGATCGCTATTCCATGGGACAAGATGGAGGAAGATTATGTGAAAACTCCAAAGAAATGGTCAGAGAGAGGGTTGCCGATGTTCATATTGTGGAATAATCCTGTGTGCACACTATGTGATGTTGGAGCTCTTTTGTTTATTTGGTTCTATTACAAGGCTTATGCGGATCAAAAGTTTTGCCATTCAGCTTGGTTCGTTGAGGGGTTGCTGATGCAGACTCTGATTATCCATTTGATACGCACGGAGAAAATTCCATTTATTCAGGACGTAGCTTCATGGCCTGTTCTCTGTTCCACTGTTTTGATTTCCACTATTGGAATTGCACTTCCATTCACCCCCATTGGAGACGTCCTGGGACTCACGAGTCTGCCTCTCTCGTATTTTGGGTTTTTGGTTGTTCTTTTTCTGGTTTATTTCACTGTTGGCCAGGTGGTCAAGAGACTCTACATATTGATTTTTAAAAGATGGCTTTAA 2790 0.4233 MLPRSIRQTLIQKSNAPSKRFPQSVLGLFRRLFSATAKKADGGSRTEEEERVYSWLYTLARSERNLVFEYVRSTERGLSFTEADRRLKETGPNVLHEHTFPRWWHLLWSALFHPFNIILVVLSILSFISGDIPNGCIMLTLVFISVSLRFYQEYSSSKAAMKLSEFLRSPIKVQRCAGRVVQQELVVQVDQRDIVPGDIVIFEPGDLFPGDVRLLSSKNLVVSQASLTGESWATDKTADVRESLSTPLLDLKNICFMGTNVVSGSGTGLVISTGSNTYMNTMFSKIGKKPPDEFEYGLRWIFFVLVAIMLVAVTVIFVTDYSTSGDLSTSIIFAISVASALTPQMLLLIINTCLAKGALAMARDRCIVKSLASIRNMGSMDILCIDKTGTLTMNRAIMVNHLDCQGITQEKVLRFAFLNSYFKTDQKYPLDDAILAFVYSNGFRFQPSKWMKIDEIPFDFIRRRVSVIIETESRMEDRESQLSGRFMVTKGALEEVMRVCSFIENFNNNEVSKFSSDDYNRILSLAEGLSNEGLRIIGVAIKKLEKQTSETSTRSRSSKENVETDMVFLGVITFYDPPKDSAEQALWRLAEKGVKAKVLTGDSLSLTMRVCREVGIRTTHVITGPELDQLDQETFHETVKRATVLARLTPIQKLRIVQSLQTVGNHVVGFLGDGINDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYIKTSVIGNLGGVLSLLVATLMLKFEPVTSRQLLTQNFLYSVGQIAIPWDKMEEDYVKTPKKWSERGLPMFILWNNPVCTLCDVGALLFIWFYYKAYADQKFCHSAWFVEGLLMQTLIIHLIRTEKIPFIQDVASWPVLCSTVLISTIGIALPFTPIGDVLGLTSLPLSYFGFLVVLFLVYFTVGQVVKRLYILIFKRWL 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2188 929 NCBIfam HAD-IC family P-type ATPase 632 750 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g2188 929 NCBIfam HAD-IC family P-type ATPase 138 429 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g2188 929 Gene3D - 133 879 - -
Prci4g2188 929 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 378 578 IPR023299 GO:0000166
Prci4g2188 929 Gene3D - 169 273 - -
Prci4g2188 929 Pfam Cation transporting ATPase, C-terminus 755 920 IPR006068 -
Prci4g2188 929 Gene3D - 396 575 IPR023299 GO:0000166
Prci4g2188 929 SUPERFAMILY Calcium ATPase, transmembrane domain M 73 926 IPR023298 -
Prci4g2188 929 NCBIfam magnesium-translocating P-type ATPase 58 928 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 SUPERFAMILY Calcium ATPase, transduction domain A 179 284 IPR008250 -
Prci4g2188 929 Pfam E1-E2 ATPase 179 363 - -
Prci4g2188 929 Pfam Cation transporter/ATPase, N-terminus 70 126 IPR004014 -
Prci4g2188 929 Pfam haloacid dehalogenase-like hydrolase 380 685 - -
Prci4g2188 929 SFLD C1.7: P-type atpase like 366 721 - -
Prci4g2188 929 Gene3D - 381 708 IPR023214 -
Prci4g2188 929 ProSitePatterns E1-E2 ATPases phosphorylation site. 386 392 IPR018303 -
Prci4g2188 929 PRINTS Magnesium-transporting ATPase signature 779 792 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 PRINTS Magnesium-transporting ATPase signature 882 903 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 PRINTS Magnesium-transporting ATPase signature 729 744 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 PRINTS Magnesium-transporting ATPase signature 314 333 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 PRINTS Magnesium-transporting ATPase signature 747 758 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 PRINTS Magnesium-transporting ATPase signature 297 313 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 PRINTS Magnesium-transporting ATPase signature 832 853 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 PRINTS Magnesium-transporting ATPase signature 418 431 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 PRINTS Magnesium-transporting ATPase signature 799 815 IPR006415 GO:0015444|GO:0015693|GO:0016020
Prci4g2188 929 SFLD p-type atpase 366 721 IPR044492 -
Prci4g2188 929 SUPERFAMILY HAD-like 562 719 IPR036412 -
Prci4g2188 929 PANTHER CATION TRANSPORTING ATPASE 69 919 - -
Prci4g2188 929 SMART Cation_ATPase_N_a_2 58 131 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2188 Prci-Chr4 34317984 34323127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2188 54 826 Primary Pumps ATPases(2) AT1G07810 24.691 1.68e-55 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2188 K01531 - gmx:100795153 1441.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2188 4 34317984 34323127 Prci4g2188 4 34317984 34323127 ECH