Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2184 ATGGGTCTCTCAAACATTCTTAATTTATCTGAAGGGATTCTTCCCGCTCTCGTGGTGAACACGGTGCTCTCAGTGGTTCTTCTGAAGAACATGCTGAGATCTGTTCTGGAAGCTGTTGGCGTGACATCCTCGTCGTCTTCGTCGTCGTCTTCTCAGAACATGGAGGAAGACTCCGATGAAGAAGGGGACAGAGAGAGTTGCGGAAGAAGGAGGGTGTCGATAACACAGTACAAGGAGGTTTGCGGAGGAACATCAACGAGTGACTCTGATTCGCGTGTGGGTGGATTGGGTACGGTGGAGTGTTGCGTATGTCTGAGTGGGTTCGAAGCGAATCAAGAGGTGAGTGAATTGCCCTGCAAGCATTTCTTCCACAGAGGTTGCTTGGACAAGTGGTTCGATAATAAACACTTATCTTGTCCTCTTTGTCGTTCCATAGATTAG 441 0.4853 MGLSNILNLSEGILPALVVNTVLSVVLLKNMLRSVLEAVGVTSSSSSSSSSQNMEEDSDEEGDRESCGRRRVSITQYKEVCGGTSTSDSDSRVGGLGTVECCVCLSGFEANQEVSELPCKHFFHRGCLDKWFDNKHLSCPLCRSID 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2184 146 SMART ring_2 101 142 IPR001841 -
Prci4g2184 146 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Prci4g2184 146 MobiDBLite consensus disorder prediction 42 69 - -
Prci4g2184 146 PANTHER - 1 144 IPR044249 -
Prci4g2184 146 SUPERFAMILY RING/U-box 100 144 - -
Prci4g2184 146 Pfam Ring finger domain 100 143 IPR001841 -
Prci4g2184 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 145 IPR013083 -
Prci4g2184 146 SMART ringv_2 100 143 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2184 Prci-Chr4 34224930 34225797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2184 1 144 C3H Transcription Factor Family AT2G04240 34.615 4.71e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2184 K16285 - gmx:100811790 158.688