Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2117 ATGAGTCTGCAAGTTGAAGTAATCTCTCGAGAAATGGTGAAACCATCATCTTCTACACCTCAACATCTTCGCGATTACCCTCTCTCCTTCATCGACCAGATAACTCCCCAAATCAACAATTCTATGGTCTATTTCTTCGAGGCCGATGATAATGCCGCACACAAATTGAGCATCAACGAAGCTTCCGATCTTCTCAAGAAATCGTTATCTCATGTCTTAACTCACTTCTACCCACTCGCCGGAAGACTCATCACCAAGAACTTACTCGTAGACTGCAACGACGAGGGTGTCCCTTACGTGGAAACGAGAGTCAGGTGCCATCTCCGCCACATCATCGACAGCCCCTCTACTGCTGACGTCAGCAAGCTGCTTCCCTACGACATGGATGAAATCGTCGACACCGTCCTAGGTGTCCAGTTCAACGTCTTTGATTGCGGCGGAATGGCAGTTGGTGTCAGTCTCTCCCACAAGATTGCTGATGCGATGTCGTATTTCCAGTTCATCAAGAGCTGGGCAGCCATGACACGTGGCGAACCAGAACCAATCAGAACCCACTTTCAATCCTCCTCACTCTTCCCTCCAAAAGACGTGTTTGGATACGACCCGAATTCACACATCGGGCAACACAAAGTCGTTTGCAAGAGGTTCGTATTTGAAGCATCCGTAATAGAATCTCTGAGAACAAAATATTCCAAGAAGGTTCAAGAAGGCCAAAAACCACCTTCAAGGGTCGAAGTGTTATCAACTTTCCTATTGAACAGGTTCGCTGCTGCTACAAAAGATCATGAAGGGGGCAATAATAAGATTCACTTGGTGACATCTACAATGAATCTACGCCCAAGGATGGAGCCTCCATTGCCAGAATATGCGTTCGGGAACTATTACTGGTATGTTCAAACGTTTCCAACGTTGGACGGGAAAGGAGAGTGCAATGACCTAGGAAGACAGCTACGAGAAGAGCTACGTAAAGTGGACAATGATTTTATTGAGAGGCTTCGAGAAAGCAAAGAATGGAACCCTAATACAGAAGAGATGGGCAGAGCAATTGAGAAAGGAGAGTTGGTGCTAGTTACTTTCACTTCACTTTGTAGGTTTCCGGTGTACGAGCTTGATTTTGGTTGGGGGAATCCAGCGTGGATCGGACCGCCTACGTGGAAATTCAAGAATGTGATTGCTCTTAAAGACACCAAGTCTGGTGGTGGCATTGAAGCTTATGTCAACATGACAGAGGATGACATGGCTAAATTTGAACGGGACGAGGAAGTTCTTGCTCATGCTTCTACCAAGTGGTTCAAATAA 1299 0.4619 MSLQVEVISREMVKPSSSTPQHLRDYPLSFIDQITPQINNSMVYFFEADDNAAHKLSINEASDLLKKSLSHVLTHFYPLAGRLITKNLLVDCNDEGVPYVETRVRCHLRHIIDSPSTADVSKLLPYDMDEIVDTVLGVQFNVFDCGGMAVGVSLSHKIADAMSYFQFIKSWAAMTRGEPEPIRTHFQSSSLFPPKDVFGYDPNSHIGQHKVVCKRFVFEASVIESLRTKYSKKVQEGQKPPSRVEVLSTFLLNRFAAATKDHEGGNNKIHLVTSTMNLRPRMEPPLPEYAFGNYYWYVQTFPTLDGKGECNDLGRQLREELRKVDNDFIERLRESKEWNPNTEEMGRAIEKGELVLVTFTSLCRFPVYELDFGWGNPAWIGPPTWKFKNVIALKDTKSGGGIEAYVNMTEDDMAKFERDEEVLAHASTKWFK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2117 432 Gene3D - 208 427 IPR023213 -
Prci4g2117 432 Pfam Transferase family 4 422 - -
Prci4g2117 432 Gene3D - 1 201 IPR023213 -
Prci4g2117 432 PANTHER F21J9.9 6 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2117 Prci-Chr4 33354426 33356030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2117 3 418 Monolignol Biosynthesis Gene Families AT5G48930 23.282 1.40e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2117 K13065 - gmx:100801695 489.574