Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2116 ATGAGCCTGCAAGTTGAACTAGTCTCTCAAGAGATGGTGAAACCATCGTCTCCAACACCTCAACATCTTCGTCATTACCATCTCTCCTTCCTCGACCAGTATAGCCTGCAAATCCACAATTCCATGGTTTACTTCTTCGACGATGGTATCACAAGCAAGTTCAATATCATCGAAGAAGCTTCCGATCTTCTCAAGAAATCGTTGTCTCAAGTCCTGACTCACTATTACCCACTCGCGGGAAGACTCAGAATCAAGAACTTACTCGTCGACTGCAACGACGACGGTGTTCCTTACAAAGAAACCAGAGTCAGGTGCCACCTCCGCCACGTCATCGACAGTCGCTCTCCTGCTGACGTCAGCCGGCTGCTTCCCTACGACATGGATGAAATCGTCGACACAGTCCTAAGTGTCCAGTTCAACGTCTTCGATTGTGGCGGAATAGCTGTCGGAGTCTGTCTCTCACACAAGATCGCCGACGCTATGTCGTATTTCCAGTTCATCAAGAGCTGGGCCGCCGTGACACGTGGCGAACCGCCAGAACAAATCAAAACCCACTTCCAATCTTCCTCGCTCTTCCCGCCAAAAGAGGTTTTCGGATACGACCCGAATGTATACATCGGAGAGAACAAAATCGTGGGAAAGATGTTCGTGTTCGAATCATCCGCAATAGAATCTCTCAGAACAAAATATTCCCAAAAGATGGAGAACGTTCTAGAAGGCCAAAAACCACCTTCAAGAGTCGAAGTGTTACAAACTTTCCTATTCAACAGGTTAATTGCAGCCACCAAAAACGAAGACGAAGGTCCCGACAAGATTCACTTACTGACATACGCAGTGAATCTACGACCAAGAATGGAACCTCCATTACCAGAATATGCATTCGGAAATTATTACTGGTCTATTGAAGCTTTTCCGATATTAATGGAGGAAGGAGAGTGTAAGAATCTTGGAAGACAGTTAAGAGAAGAGCTAAAAAAAGTGGATAAGGATTTTACTGTGAAGCTTCGAGAAAGCAAAGAATGGAAGTTTAATAGAGAAGAGACGGGTAGCGAGATTGCGAAGGGAGAGATAGTTCTGTTTATTTTCACGTCTCTGTGCAGGTTTCCGGTCTACGAGGTTGATTTTGGATGGGGCAATCCGACGTGGGCAGCACCACCTACGTGGAAATTCAAGAATTTTGTTACTTTAAAAGACACTAAATCAGGTGGTGGCATTGAAGCTTATGTCAACTTGGCAGAGGATGACATGGCTAAATTTGAACGTGACGAGGAACTTCTTGCTTATGTTTCTATAGCAAGATTGAAATAA 1308 0.4495 MSLQVELVSQEMVKPSSPTPQHLRHYHLSFLDQYSLQIHNSMVYFFDDGITSKFNIIEEASDLLKKSLSQVLTHYYPLAGRLRIKNLLVDCNDDGVPYKETRVRCHLRHVIDSRSPADVSRLLPYDMDEIVDTVLSVQFNVFDCGGIAVGVCLSHKIADAMSYFQFIKSWAAVTRGEPPEQIKTHFQSSSLFPPKEVFGYDPNVYIGENKIVGKMFVFESSAIESLRTKYSQKMENVLEGQKPPSRVEVLQTFLFNRLIAATKNEDEGPDKIHLLTYAVNLRPRMEPPLPEYAFGNYYWSIEAFPILMEEGECKNLGRQLREELKKVDKDFTVKLRESKEWKFNREETGSEIAKGEIVLFIFTSLCRFPVYEVDFGWGNPTWAAPPTWKFKNFVTLKDTKSGGGIEAYVNLAEDDMAKFERDEELLAYVSIARLK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2116 435 PANTHER F21J9.9 6 430 - -
Prci4g2116 435 Gene3D - 208 429 IPR023213 -
Prci4g2116 435 Gene3D - 1 201 IPR023213 -
Prci4g2116 435 Pfam Transferase family 4 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2116 Prci-Chr4 33337774 33339081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2116 3 421 Monolignol Biosynthesis Gene Families AT5G48930 23.333 7.59e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2116 K13065 - gmx:100801695 469.159