Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2101 ATGTATTTATCAGAGAAGCCTCGCCCTATCGATTTCTACAAAGAAGAAGGGAGCCGAGATATGATGATCGAGGTTGTTTCAAATGGCGAACTCGCTCCTCCTCACCAACAACCCCCACAACATCAAATGATTCTTGGCGAGAGTAGTGGTGAGGACCACGAAGTTGAAATCAAGGCTCCCAAGAAGCGTGCTGAGACTTGGGTTCAAGACGAGACTCGGAGTTTGATTGCCTTTCGCCGTGAGATGGATGGGCTTTTCAATACATCCAAGTCCAACAAGCATTTGTGGGAACAAATATCGGCGAAGATGAGAGAGAAGGGGTTTGATCGCTCGCCCACTATGTGCACGGACAAATGGAGGAATCTGTTGAAGGAATTTAAGAAGGCTAAGCACCAGGATAGGGGAAGTGGTTCTGCTAAGATGTCGTATTATAAAGAGATTGAAGAGATTCTCAGGGAGAGGAATAAGAGTATGCAGTACAAGAGCCCTACACCTCCTAAGGTTGATTCTTATATGCATTTTGCAGATAAAGGTATTGATGATACTAGCATCTCTTTTGGCCCAGTTGAAGCTGGGAGACCAACACTCAATCTTGAGAGGCGTTTGGATCATGATGAACATCCTCTTACCATTGCTGCAGCTGATGCTGTTGCAGCAAGTGGAGTGCCTCCTTGGAATTGGAGAGAAACTCCTGGAAATGGTGGGGAAGGTCAATCATGTTGTGGGAGGGTTATATCAGTCAAATGGGGTGATTATACGAGAAGAATAGGTATTGATGGCGCATCAGATGCCATCAAGGAAGCAATAAGGGCTGCTTTTAGGCTGAGAACTAGACGTGCGTTTTGGTTGGAGGATGAAGAACAGATAATCAGAAGTCTTGACCGTGACATGCCTTTAGGAAATTACACTCTTCACCTAGATGAAGGAATGGCCATTAAAATATACCTCTATGATGACTCTGACCATATCCCTGTTTATGAGGATAAGATCTTTTACACTGAAGATGATTACCGTGATTTCCTGACACGTCGGGGCTGGACATGTCTGAGGGAAGTTGATGGCTATAGAAACATTGAGAATATGGATGATCTTCGACCTGGTGCCATATATCGTGGTGTGAGTTAA 1125 0.4471 MYLSEKPRPIDFYKEEGSRDMMIEVVSNGELAPPHQQPPQHQMILGESSGEDHEVEIKAPKKRAETWVQDETRSLIAFRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEEILRERNKSMQYKSPTPPKVDSYMHFADKGIDDTSISFGPVEAGRPTLNLERRLDHDEHPLTIAAADAVAASGVPPWNWRETPGNGGEGQSCCGRVISVKWGDYTRRIGIDGASDAIKEAIRAAFRLRTRRAFWLEDEEQIIRSLDRDMPLGNYTLHLDEGMAIKIYLYDDSDHIPVYEDKIFYTEDDYRDFLTRRGWTCLREVDGYRNIENMDDLRPGAIYRGVS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2101 374 Gene3D - 67 129 - -
Prci4g2101 374 FunFam trihelix transcription factor GT-1 67 129 - -
Prci4g2101 374 PANTHER FI21293P1 42 373 - -
Prci4g2101 374 SMART sant 63 125 IPR001005 -
Prci4g2101 374 CDD GT1 65 130 - -
Prci4g2101 374 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Prci4g2101 374 Pfam Myb/SANT-like DNA-binding domain 66 150 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2101 Prci-Chr4 32675397 32680921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2101 1 373 Trihelix Transcription Factor Family AT3G25990 68.041 0.0 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci4g2101 Myb_DNA-bind_4 7.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2101 - - gmx:100809497 659.448