Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2100 ATGGCTCTTCTTGTTGATGCTCCATTGGGTATACTCAATGTGGCATTCTTCATCGCTGTGTTGTTATGGGTTTTGGTTGATAGTTTAAGAGAAAGTAGGCGTAGCGGTGTTGTGTATTTGAAATACGTACCGAAACGATTCGCAGTTTTCTGCACAATCACGCTTGTCTTTCATGTTCTTATTTCGGGTTTGATCTTCGCTTTTGCCTTTCATGAATATTGGACGGAGAAAATTGTGTCGTATTATTCTGTTTCGTTGGCTCTCACTTGGGTTTTAGCGACCTTGGTTTCATTATACTCCATGAAGAGAATACGCGCCGAAAATCGAACGTGGCCTCTCGTTTTGATTCTCTGGTGGTTCTACGCCACTGTATTGGATTCATTCTTCGTTTCTGTGAAAGTCATCAAGAATTTCAAATCCTTGGATTTGTCTTTCTTTCTGTCAGAGGACAACGTGGTGGATTTCGTTTCCTTTCCTCTCTTGTTACTTCTCTGGTTCAATGCTCTGCCTTCTATATGGGCGAGGAAATGCAGTGAATCTGAACAAGTGTTGCTTCAAAAGGAGGAGGAAGAAGAACAAGAAGAAGATAAGGAAGCATTCGTAAATGCTGGAATATGGAGCAAGCTCACGTTTCGATGGCTGAATCCTATTTTCAGGAGAGGTCAGATTAAGAAACTTGAACTTCCTCATATCCCTCCGGTTCCCCAATCTGAAACTGCAGAATATGCTTCTTCCATGCTGGAAGATTCACTCCGAAAACAAAAAATTGAAGAGGGTTCGTTGACGAAAGCTATTGCTCATTCTATCTGGAAATCCCTGACCTTAAATGCAGTTTTTGCAGGTGTTAACACCATGGCCTCTTACATGGGTCCCTTGTTGATCACAAACTTCGTGAATTTCCTATCGGGAAATTATAATGATTCAAGCATCTACTACGGGCTAATTTTGGCGTTCATTTTCTTCCTGGCGAAGACTCTGGAATCGCTAACTCAAAGGCAATGGTACTTTGGTGCTCAACGAATAGGAATTCAAGTACGTGCAGCTCTCACGGGTCTGATATATATCAAATCATTGTCAATCAAGTGTGGTGGACCAACACATGGCAAAATCATAAACTTAATCAACGTGGATGTTGAAAGGATTGGGGATTTCTGCTGGTACATTCATGGAGTATGGTTGCTTCCAGTTCAGGTTGTGTTGGCCTTGGTTATCTTGTACAGGAACTTAGGATTTACACCCTCCATTGCTGCATTTGGTGTCACTGTTTTGGTCATGGTGTGCAACACTCCCATGGCTAATAAGCAAGAAAGTCTTCATTCCAAGATCATGGAAGCTAAGGATTCAAGGATTAAAGCGACTTCAGAGATACTAAAGAACGTGAGAATTTTGAAATTGCATTCATGGGAATCCACATTTCTGAAGAAGCTCCTTCAGCTTAGGGAAACTGAGAAGAGCTGGCTTAAGAGATATCTGTATACATGCTCAGCAGTGACATTTCTGTTTTGGACATCGCCAACTCTTGTTTCTGTGGTCACTTTTGGTGTCTGTATAATGGTGAAAACAGAATTAACAGCAGCCACAGTTCTCTCAGCTTTGGCAACTTTTCGTATCTTGCAAGAACCAATCTACAACTTACCTGAGCTTGTTTCCATGATAGCTCAAACAAAAGTGTCAATTGATCGAATCCAAGAGTTCATTAGAGAAGAGGATCAAATGCAATTCACGGCCAAGCCCACATCGACACGTTCTGATGTTGCCATTGAAATCAAACCAGGCGAATACTCATGGGAAGCTGATGATCAGTACAATAAACCAACTATTCAAATTACAGAGAAGTTGACAATAGAGAAAGGTCAAAAGGTTGCAATATGTGGATCAGTGGGGTCTGGCAAATCAAGCCTGCTATGCTGTATGCTTGGTGAGATTCCAAGGATTTCAGGGGCAGGAATTAAAGTATGTGGAAATAGAAGTTATGTGCCCCAAAGTCCTTGGATTCAATCGGGGACTGTAAGAGAAAATATACTGTTTGGCAGGAAAATGAACACGGATTTGTACAACAATGTCCTGGAATGCTGTGCTTTGCACCAGGATATCAACCAGTGGGAAGATGGGGATTTGACCATTGTGGGGGAGAGGGGCATAAACTTAAGTGGAGGCCAAAAACAGAGAATTCAACTTGCCAGAGCTGTTTACAATGATTCAGATGTTTATTTCCTAGATGACCCTTTCAGTGCTGTTGATGCTCATACTGGAACCCATTTGTTTAAGAAATGTCTCTTAAACCTTCTATCTGAGAAGACAGTTGTTTATGCTACACATCAACTGGAATTTTTGGAAGCTGCAGATCTTGTCTTGGTAATGAAAGAAGGAAAAATAGTTGGGTCGAGAAAGTATAAAGATCTGATAGCATGTCACACTCGTGAACTTGTTGATCAAATGGCTGCTCACAAGGAAACAATAAAGCAAATTAGACCATGCCACGAGGATAAATCCTTACACAACAACTGTACACCATGTCAGGTACATCAAATTGAAGTAGCTGAAACAAATCTTATTAAGAACTCTGAAGAAGACAGGAATCATTTGGAGAGAACTAAAGAAGAGAAAGCAGAGACGGGTCGGGTTGATTGGAGTGTTTACTCAACCTTTGTCACGTTTGCTTATAAAGGCGCATTTGTTCCCGTTATTCTCCTTTGCCAAATTCTATTTCAAGGAATGCAAATGGGAAGCAATTATTGGATTGCTTGGGCTGCAGAACAAAGAGACAGTGTCAGTAAAGGGACGCTCATGGGGACCTTTGTTCTGTTATCTGGTGGCAGTTCCATCTTCATACTGGGAAGGGCTGTTTTCATGGCAAAAATTGCTGTAGAGACCGCTCAACGTCTTTATCATGAAATGATTACGTCAGTTTTCAGAGCTCCTGTTTCATTTTTTGATGCCACCCCTTCAAGCAGAATCTTGAATAGGTGTTCCACAGATCAAAGTACAGTTGACACAGATATACCATACAGACTAGCTGGACTTGTATTTGCACTTATCCAGTTATTGAGTATCATCATTCTAATGTCTCAGGTTGCTTGGCAAGTCATTCTTCTTTTTGTTGTGCTTGCGATCTCCATCTGGTATCAGGCTTATTACATTACTACTGCGAGAGAATTGGCTAGAATGGTAGCGATCAGAAAGGCTCCTATCTTGCATCACTTCTCAGAATCAATTGCCGGGGTGGTCACAATCCGTTGTTTCAATCAACAGCAAAGATTTTATGGGAAAATTATGACTCTAATTGATGATTATTCTTGTGTGGCATTTCATAATTATGCCACCATGGAATGGTTATCTATTAGAATAAACTTCCTGTTTAACTTGGTCTTCTTTTTTGTTCTCATCATCTTGGTAACACTGCCAAGTTCTGCCATTGACCCCAGCTTGGCAGGTTTGGTAGCTACTTATGGTTTGAACTTGAGTGTTCTTCAGGCTTGGGTGATATGGAACCTCTGCAATGTGGAAAACAAAATGATATCAGTTCAGAGAATACTGCAATTCACTAAGATACCAAGTGAAGCTCCATTGATAATTCAAGATTGTAGGCCACAACCAGAATGGCCAAGGGAGGGGAAAATTGAACTTCATAATCTTCATATACAGTATGATCCTGCAGCTCCTATGGTTCTCAAAGGTGTCACTTGCACTTTTCCAGGACACAGGAAGATTGGAGTTGTAGGGAGGACAGGAAGTGGAAAATCCACTTTAGTGCAAGCTCTCTTCCGTGTGGTGGAACCTTCAGTAGGATGGATACTCATTGATAGTGTAGATATTTGCAAGATGGGCCTAAAGGATTTAAGATCTAGGCTTGGTATAATTCCTCAGGATCCTACTTTGTTTCAAGGTACTGTAAGGAACAACCTGGATCCTCTTGATCAACACTCAGATCAAGAACTTTGGGAGGTTCTCAGTAAGTGCCATCTTGCTGATATAGTTAGAAAGGATCCAAGACTTCTTGATGCATCAGTGGCTGAGAATGGAGAGAATTGGAGTGTTGGACAAAGGCAGCTTGTTTGTCTTGCAAGGCTGCTATTAAAGAAGAGAAGGATTTTGGTTCTTGATGAAGCTACTGCATCGATCGACACGGTGACAGATAATTTGATTCAAAATACTATCAGAGAAGAGACAAGTGAATGTACAGTCATTACAGTAGCACATAGGATTCCTACAGTTATTGATAATGACCTTGTATTGGTCCTCGATGAAGGGAAGATTGCAGAGTTTGATCAGCCAGCTAAGTTGCTGGAGGACAATTCATCATCATTCTCAAAGCTAGTATCCGAATTCTTGAGGAGATCAACCCAAAGTGATTGCCAAAAGGATACAATGTTGAGGACAGAGAGGAAGTCCTCATGA 4398 0.4116 MALLVDAPLGILNVAFFIAVLLWVLVDSLRESRRSGVVYLKYVPKRFAVFCTITLVFHVLISGLIFAFAFHEYWTEKIVSYYSVSLALTWVLATLVSLYSMKRIRAENRTWPLVLILWWFYATVLDSFFVSVKVIKNFKSLDLSFFLSEDNVVDFVSFPLLLLLWFNALPSIWARKCSESEQVLLQKEEEEEQEEDKEAFVNAGIWSKLTFRWLNPIFRRGQIKKLELPHIPPVPQSETAEYASSMLEDSLRKQKIEEGSLTKAIAHSIWKSLTLNAVFAGVNTMASYMGPLLITNFVNFLSGNYNDSSIYYGLILAFIFFLAKTLESLTQRQWYFGAQRIGIQVRAALTGLIYIKSLSIKCGGPTHGKIINLINVDVERIGDFCWYIHGVWLLPVQVVLALVILYRNLGFTPSIAAFGVTVLVMVCNTPMANKQESLHSKIMEAKDSRIKATSEILKNVRILKLHSWESTFLKKLLQLRETEKSWLKRYLYTCSAVTFLFWTSPTLVSVVTFGVCIMVKTELTAATVLSALATFRILQEPIYNLPELVSMIAQTKVSIDRIQEFIREEDQMQFTAKPTSTRSDVAIEIKPGEYSWEADDQYNKPTIQITEKLTIEKGQKVAICGSVGSGKSSLLCCMLGEIPRISGAGIKVCGNRSYVPQSPWIQSGTVRENILFGRKMNTDLYNNVLECCALHQDINQWEDGDLTIVGERGINLSGGQKQRIQLARAVYNDSDVYFLDDPFSAVDAHTGTHLFKKCLLNLLSEKTVVYATHQLEFLEAADLVLVMKEGKIVGSRKYKDLIACHTRELVDQMAAHKETIKQIRPCHEDKSLHNNCTPCQVHQIEVAETNLIKNSEEDRNHLERTKEEKAETGRVDWSVYSTFVTFAYKGAFVPVILLCQILFQGMQMGSNYWIAWAAEQRDSVSKGTLMGTFVLLSGGSSIFILGRAVFMAKIAVETAQRLYHEMITSVFRAPVSFFDATPSSRILNRCSTDQSTVDTDIPYRLAGLVFALIQLLSIIILMSQVAWQVILXLFVVLAISIWYQAYYITTARELARMVAIRKAPILHHFSESIAGVVTIRCFNQQQRFYGKIMTLIDDYSCVAFHNYATMEWLSIRINFLFNLVFFFVLIILVTLPSSAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVQRILQFTKIPSEAPLIIQDCRPQPEWPREGKIELHNLHIQYDPAAPMVLKGVTCTFPGHRKIGVVGRTGSGKSTLVQALFRVVEPSVGWILIDSVDICKMGLKDLRSRLGIIPQDPTLFQGTVRNNLDPLDQHSDQELWEVLSKCHLADIVRKDPRLLDASVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTVTDNLIQNTIREETSECTVITVAHRIPTVIDNDLVLVLDEGKIAEFDQPAKLLEDNSSSFSKLVSEFLRRSTQSDCQKDTMLRTERKSS 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2100 1466 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 895 1171 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g2100 1466 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 202 1448 - -
Prci4g2100 1466 FunFam Multidrug resistance-associated protein 4 572 831 - -
Prci4g2100 1466 Coils Coil 852 872 - -
Prci4g2100 1466 Gene3D ABC transporter type 1, transmembrane domain 855 1189 IPR036640 GO:0005524|GO:0016020
Prci4g2100 1466 Gene3D ABC transporter type 1, transmembrane domain 261 571 IPR036640 GO:0005524|GO:0016020
Prci4g2100 1466 CDD ABCC_MRP_domain2 1206 1426 - -
Prci4g2100 1466 Gene3D - 609 837 IPR027417 -
Prci4g2100 1466 Gene3D - 1191 1444 IPR027417 -
Prci4g2100 1466 FunFam ABC transporter C family member 3 1191 1443 - -
Prci4g2100 1466 CDD ABCC_MRP_domain1 587 791 - -
Prci4g2100 1466 CDD ABC_6TM_ABCC_D1 275 562 IPR044746 GO:0140359
Prci4g2100 1466 Pfam ABC transporter transmembrane region 910 1136 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g2100 1466 Pfam ABC transporter transmembrane region 274 541 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g2100 1466 Pfam ABC transporter 1225 1373 IPR003439 GO:0005524
Prci4g2100 1466 SUPERFAMILY ABC transporter transmembrane region 896 1188 IPR036640 GO:0005524|GO:0016020
Prci4g2100 1466 SUPERFAMILY ABC transporter transmembrane region 267 569 IPR036640 GO:0005524|GO:0016020
Prci4g2100 1466 ProSitePatterns ABC transporters family signature. 716 730 IPR017871 GO:0005524|GO:0016887
Prci4g2100 1466 CDD ABC_6TM_ABCC_D2 893 1183 IPR044726 GO:0140359
Prci4g2100 1466 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 277 554 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g2100 1466 FunFam ABC transporter C family member 10 257 570 - -
Prci4g2100 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1208 1442 IPR003439 GO:0005524
Prci4g2100 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1199 1434 IPR027417 -
Prci4g2100 1466 SMART AAA_5 617 791 IPR003593 GO:0016887
Prci4g2100 1466 SMART AAA_5 1234 1421 IPR003593 GO:0016887
Prci4g2100 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 804 IPR027417 -
Prci4g2100 1466 Pfam ABC transporter 612 743 IPR003439 GO:0005524
Prci4g2100 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 589 814 IPR003439 GO:0005524
Prci4g2100 1466 FunFam ABC transporter C family member 5 856 1189 - -
Prci4g2100 1466 Coils Coil 177 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2100 Prci-Chr4 32642275 32648823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2100 559 813 Calmodulin-binding Proteins AT2G36910 28.938 1.24e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2100 - - gmx:100809063 2090.46