Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2094 ATGCCTCTCGTCAAATTTCCCGCCATTTTTCTCCGTTTCCTTACTTTCGGTCTCCCTTGGGAAACCCTAGTCCTGGAGCAGGAAGAGATGGCAATTGAAGAGGAAATTAATGCAGAGTTCCGAAGAAGCGGGTTTGACCTTGAAGATGAAGAAGAAATTCTAAACAAATGTCTCCCTTTTTGCATAAACTACAGTCTCAAGCCTTCCGATCTCATTTCAAGCTGGGAGGTTTATTATCTAAACAGACAGCTGGATGGATCAACAGTGCAAAGTGCTGAAATAGATGGCTTTTTGGTGCACCTACAAAATGAGCAGAAAGAAGCTATTATCAAGGAGAAAACTGATATTCATATATACTCAAGTAGAGACGTGGAGATGATCTTAAATGATGATGATATTTCAAAAGATAATGCTCCTGGAACTCCAACTGACCATCAACAAGATCTTTTATCACCTGCATATGATTCAACCTCTTTAACTAATGGAAGTGTTTTATCATCTGGAAAATCATCGAAAGTTGCAACAGCTTTTTCTAAGCGAACAAATAAGGTTGAGGTGAAGTTCAGCATCAACAACATGCCTATTCTAGAGAATGGAAAACAAGAACCTGGTCATGAGAATGATGAGGATGACATAGTTAGAAAGGTTCATGCACGGCAAAGGTGTTCATTGGTGGTTCATGAATCAGGGCCCAGACCAGGTTGTAGATTCATGTATGACAGGACTGAAGACAGGTTTAATGCATTAGAAAACCGAATTAAGAAACATGCAAGGGTACATGTGGCTTCTGGGCTCTATGAAGAACCAATGGACCCTACAATTGCTTCACAGAGAAGCATTTTCACTGTTGGCATGATTTGTTGTGATGGAGAAGGGCATCTAAATGAGAAGTCACTCATGCTGCAGAGCAGTGCTGAGACCTCTGGAGGGCAACGTGTTCGCCTAGAATTACAACAACTAAGCCACTTTTCAGTTTTCCCTGGCCAGGTAGTTGGTATTGAAGGGCATAATCCCAGTGGACACTGTTTAGTGGCATCCAAAATGGTGGATTCTATAGTTTCCTCTGTTGGTGATAGTGAGAATTTGAATCCAGCAAAGAAGCTAGCCTTTGATAAGGAAAATCATCCAACCGATCTGCCTTGCAAGCAGAGGGAGTTATCAATGGTTATTGCAGCTGGCCCTTTTACCACCACAGACAATTTATTGTTTGAACCTCTAGCAGAATTGCTGGCATATGCAAAGAAAAGACCTCCACAATTGATTATATTGATGGGACCATTTATTGACACTGAACACCCAGACATTAAAAAGGGAGCCACGGAGAGGACCTTTGATGAAATATTTCGTATTGAAATTCTCAGAAGGTTGGAAGATTATGTAGAATGTATGGGTTCTGCAGTACGTATTCTTCTTGTACCATCTATACGAGATGCTAACCATGATTTTGTTTTCCCTCAGCCCGCATTTGATGTCAATCTTCGTGATCTCAAGCCTCAGATAGCCAGTCTCACTAATCCTGGAATTTTTGAAGCAAATGAGGTCAAGATTGGTTGTTGCACTGTGGATATTCTCAAGCATCTGAGTGGGGAGGAGATATCACGAATTTCAGCAGATGGAAAACCTAGTGATCGCATGAGTAGACTCGTAAACCATATTCTTAAACAGCAAAGCTTTTATCCTCTTTATCCATCGGCAGAAAGTGTTCCTTTGGACTATTCTCTTGCTCCAGAAGCTCTTCAAGTCCCGTCAGTGCCAGATGTTCTCATTTTACCTTCAGACATCAAATACTTTATCAAGGTACTTAATGAAGAAAGTGAAAAGAACCACATGAAGTGCATTTCTGTGAATCCAGGAAGACTGGCCAAGGGAGAAGGAGGGGGTACTTTCGCTGAGCTTGACTTCTATGGCAGTGCCGGGACAAGCAATGCTTCAATTGTTGGCATATAA 1947 0.415 MPLVKFPAIFLRFLTFGLPWETLVLEQEEMAIEEEINAEFRRSGFDLEDEEEILNKCLPFCINYSLKPSDLISSWEVYYLNRQLDGSTVQSAEIDGFLVHLQNEQKEAIIKEKTDIHIYSSRDVEMILNDDDISKDNAPGTPTDHQQDLLSPAYDSTSLTNGSVLSSGKSSKVATAFSKRTNKVEVKFSINNMPILENGKQEPGHENDEDDIVRKVHARQRCSLVVHESGPRPGCRFMYDRTEDRFNALENRIKKHARVHVASGLYEEPMDPTIASQRSIFTVGMICCDGEGHLNEKSLMLQSSAETSGGQRVRLELQQLSHFSVFPGQVVGIEGHNPSGHCLVASKMVDSIVSSVGDSENLNPAKKLAFDKENHPTDLPCKQRELSMVIAAGPFTTTDNLLFEPLAELLAYAKKRPPQLIILMGPFIDTEHPDIKKGATERTFDEIFRIEILRRLEDYVECMGSAVRILLVPSIRDANHDFVFPQPAFDVNLRDLKPQIASLTNPGIFEANEVKIGCCTVDILKHLSGEEISRISADGKPSDRMSRLVNHILKQQSFYPLYPSAESVPLDYSLAPEALQVPSVPDVLILPSDIKYFIKVLNEESEKNHMKCISVNPGRLAKGEGGGTFAELDFYGSAGTSNASIVGI 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2094 648 MobiDBLite consensus disorder prediction 131 153 - -
Prci4g2094 648 PIRSF DNA_pol_alpha_2 30 645 IPR016722 -
Prci4g2094 648 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 33 635 IPR016722 -
Prci4g2094 648 Pfam DNA polymerase alpha/epsilon subunit B 389 599 IPR007185 GO:0003677|GO:0006260
Prci4g2094 648 MobiDBLite consensus disorder prediction 139 153 - -
Prci4g2094 648 Gene3D - 540 644 - -
Prci4g2094 648 Gene3D - 369 535 - -
Prci4g2094 648 Gene3D - 31 106 IPR043034 -
Prci4g2094 648 FunFam DNA polymerase alpha subunit B 31 105 - -
Prci4g2094 648 FunFam DNA polymerase alpha subunit B 369 534 - -
Prci4g2094 648 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2094 Prci-Chr4 32542802 32549372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2094 30 648 Core DNA Replication Machinery Family AT1G67630 58.521 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2094 K02321 - qsa:O6P43_030564 929.858