Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2081 ATGATGGTGCTCGTAAGCTCAGGCTCAGGGCTCAGAAAGCAGGTGGTTCCTATTGATTATGAATCAGAGGTTTCGCAAAGGCTCGTCGACGCTGCTCATGACGGCGATACCGACGCTGCTTTAGAATGTATTGCCGATCCTTTTGTCGACGTCAACTTCGTCGGAACGGTGAACCTCAGGTCCAGAACGACGGAGATTGTGTTGCACGACGAGTCGTCTCATGAAGTCCGATTCGGATACGAGGAGTTCAAAACGGAGGTCACTGCACTGTTTCTTGCTGCTCATGCAGGGAATTTGATCCTGCTCAGAAAGCTCAATGTTGGAGGTAATGTGAATCAGAGATTGTTCCGGGGCTATGCCACAACGGCAGCAGTGAGGGAAGGCCACCTACAAGTTCTGGAGATGCTCATCAATGCCGGAGCGGCTCAGCCGGCATGTGAAGAGGCTCTGATGGAAGCAAGCCTCGTGGATCGGCCTACATTTGCTGAGCTGCTCTTGGATTCCAACATGATACGTCCTCAAGTTTCTGTTCATGCTCTTGTCTCTGCCTCTTGCCGAGGATTCACAAATGTTGTCCATGTACTCCTCAAGCATGGGGTGGATGCCAATGCCATTGATAGGACGTTGCTTCAATCTTCAAAGCCATTTCTCCACGCTAATGTTAATTGCAATGCATTGTTCGCAGCTGTTGTTAGCAGGCAGATCGATGTTGTGAGATTGCTCTTGCAGGTTGGAGTAAGGACTGATATTAAGGCCAAACTAGGGGCTTGGACATGGGAAACTGATAGTGGAGAAGAACTTCGTGTGGGTGTGGGATTAGCTGAGGCATACCCAATCACCTGGTGTGCTGTGGAGTATTTTGAAGCTAGTGGAGCTATATTGAGTATGTTGCTATTTCACCTCTCGCCCAACAGTTTTCACTTTGGAAGGACTCTTCTGCACCATGCGATTCTTTGTGATAACAAAAAAGCTATGATTGTGATCCTAAATTACGGTGCAAATACAGAATTGGCCATGCAAATGACTAAGGAAACAAATTTATGCCCCATTCACATGGCTACAAGGCTTGGATTACGCGACATTCTTCAATGCCTACTTGATGCTGGTTGTAACTTGGACTCCCAAACAAAATCTGGGGATACTGCATTAATGATCTCCACAAGGCATAAGCATGAAGATTGCCTTAAAGTGTTGGTCTCAGCAGGAGCTGATATGGGAATGGTAAATTCATCTGGTCAATCTGCGATGTCGTTTGCAAAGTCTGTTAAGTGGACAAACGTCTTCCAGAAAGTAATCTTGGACTTGATTCGAAGCGGAAAGGTTGTCAAATCGAGCAATGCCTCCACATTTTCTTCTTTGATTTTTGCAACTCGTGCTAATGACACACAGGCTTTGAAGGAACTCATTGAACGTAGAAACATAAATTTAGATGAACAAGATGAAAATGGATTCTCAGCCACCATGATAGCTGTAATAGAAGGTAAAGCAGAGGCTTTCAGGTTGCTTCTTAAAGCTGGAGCTGATGTTCTAAAGCTAAGAAACAAGCACGGTTTGACAGCTCTTGACCTTATAAACATGAACAAATCTGGAAAAGCTTTTGAGAAAATAATGCTTGAATTTGCACTTGAAAACGAATCTAATTGCTCCAATCTTGCGTTAAATCCTCTGCATCATGCTGCTCGCCATGGGGACACAGATCTGGTTCATAAATTAATCAAAAGAAGATTCGATATAAATGCTTTCGACCACAACGGATATACACCATTAATGTTAGCAGCAAAAGAGAGCCAAAGTAAAATGTGCGAGTTACTAATCTCATGTGGTGCCAAATGTGATATTCACAACAAGAGACATGAGACAGCTCTTTCACTTGCTAGAAAAAATGGAGCAGGAAATGATGCAGAGCGCGTAATATTCGACGAGCTAGCTCGAAGACTGGTTCTAGCCGAGGCTCGAGTAAAGAAGCACACAAGGTGTGGGAAAGGGTCACCGCATAGTAAAGAACTGAGAATGGTGGATGGTGTTGGAATTCTACGATGGGGAAAATCAAATAGAAGAAATGTGGTTTGTAAAGCAGCTGAGATTGGTCCTAGTGACAAATTCAGATGGAATCGTAGAAGGAAGTATGATGTTGATGAGCCAGGATTGTTCCATGTGGTCACTACAAAAAAGAAAGAGGTTCATTTTGTATGTGTGGGTGGTGCTGAAATGGCTCAGATGTGGGTGAGGGGTATTAAATTGGTCACCAAAGAAGCCATCTTTGGCAGAAACAACTGA 2277 0.4431 MMVLVSSGSGLRKQVVPIDYESEVSQRLVDAAHDGDTDAALECIADPFVDVNFVGTVNLRSRTTEIVLHDESSHEVRFGYEEFKTEVTALFLAAHAGNLILLRKLNVGGNVNQRLFRGYATTAAVREGHLQVLEMLINAGAAQPACEEALMEASLVDRPTFAELLLDSNMIRPQVSVHALVSASCRGFTNVVHVLLKHGVDANAIDRTLLQSSKPFLHANVNCNALFAAVVSRQIDVVRLLLQVGVRTDIKAKLGAWTWETDSGEELRVGVGLAEAYPITWCAVEYFEASGAILSMLLFHLSPNSFHFGRTLLHHAILCDNKKAMIVILNYGANTELAMQMTKETNLCPIHMATRLGLRDILQCLLDAGCNLDSQTKSGDTALMISTRHKHEDCLKVLVSAGADMGMVNSSGQSAMSFAKSVKWTNVFQKVILDLIRSGKVVKSSNASTFSSLIFATRANDTQALKELIERRNINLDEQDENGFSATMIAVIEGKAEAFRLLLKAGADVLKLRNKHGLTALDLINMNKSGKAFEKIMLEFALENESNCSNLALNPLHHAARHGDTDLVHKLIKRRFDINAFDHNGYTPLMLAAKESQSKMCELLISCGAKCDIHNKRHETALSLARKNGAGNDAERVIFDELARRLVLAEARVKKHTRCGKGSPHSKELRMVDGVGILRWGKSNRRNVVCKAAEIGPSDKFRWNRRRKYDVDEPGLFHVVTTKKKEVHFVCVGGAEMAQMWVRGIKLVTKEAIFGRNN 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2081 758 ProSiteProfiles Ankyrin repeat region circular profile. 378 409 - -
Prci4g2081 758 PANTHER ANKYRIN REPEAT-CONTAINING 21 742 - -
Prci4g2081 758 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Prci4g2081 758 SUPERFAMILY Ankyrin repeat 30 255 IPR036770 -
Prci4g2081 758 ProSiteProfiles Ankyrin repeat region circular profile. 584 616 - -
Prci4g2081 758 SMART ANK_2a 482 511 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 308 337 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 378 407 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 551 580 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 221 252 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 85 113 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 584 613 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 345 374 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 175 204 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 116 146 IPR002110 GO:0005515
Prci4g2081 758 SMART ANK_2a 448 476 IPR002110 GO:0005515
Prci4g2081 758 SUPERFAMILY Ankyrin repeat 309 635 IPR036770 -
Prci4g2081 758 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Prci4g2081 758 ProSiteProfiles Ankyrin repeat region circular profile. 551 582 - -
Prci4g2081 758 Gene3D - 303 430 IPR036770 -
Prci4g2081 758 Gene3D - 431 537 IPR036770 -
Prci4g2081 758 ProSiteProfiles Ankyrin repeat profile. 345 377 IPR002110 GO:0005515
Prci4g2081 758 ProSiteProfiles Ankyrin repeat profile. 378 410 IPR002110 GO:0005515
Prci4g2081 758 ProSiteProfiles Ankyrin repeat region circular profile. 482 509 - -
Prci4g2081 758 Pfam Ankyrin repeats (3 copies) 340 407 IPR002110 GO:0005515
Prci4g2081 758 Pfam Ankyrin repeats (3 copies) 537 613 IPR002110 GO:0005515
Prci4g2081 758 Gene3D - 17 172 IPR036770 -
Prci4g2081 758 Gene3D - 538 635 IPR036770 -
Prci4g2081 758 Gene3D - 174 260 IPR036770 -
Prci4g2081 758 ProSiteProfiles Ankyrin repeat profile. 482 514 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2081 Prci-Chr4 32408916 32412435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2081 333 520 Ion Channels AT4G32500 28.272 8.27e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2081 - - gmx:100795638 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2081 4 32408916 32412435 Prci4g2081 4 32408916 32412435 ECH