Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2062 ATGGCGGAAGAAGAGAGAGAGAGCTCAATGCAACCAGAATTTCCGACTGGTCGGGTGAAGAAAATCATGAAGCTGGATCCCGAAATCCAGAGAGTAAGTTCAGAAGCCTTGTTCCTGGTATCATGCTCCACCGAGCTCTTCCTCCGATTCATGGCTGAAAAGTCTGCACAAGTCGCCGTCGAGAAGAAGCGCAAGATTGTGAAGCTTGAACACCTAAGAATCGCTGTCAAGAGGCACCAACCAACCAGCGATTTTCTGCTTGATTCTCTTCCTCTGCCGTCTCTGCCCGTTGATCGCCCGACCAAAGATCGGAGTCAATCTAAGGATGCTGATAAGCCACCTCCACCAGGTGCTCGCCGTATTGATCATTTCTTCCGAAAGCCCGAAGACGAAGCGTCAGAACCGAGGGATGAACCTTAG 420 0.5071 MAEEERESSMQPEFPTGRVKKIMKLDPEIQRVSSEALFLVSCSTELFLRFMAEKSAQVAVEKKRKIVKLEHLRIAVKRHQPTSDFLLDSLPLPSLPVDRPTKDRSQSKDADKPPPPGARRIDHFFRKPEDEASEPRDEP 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2062 139 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 106 - -
Prci4g2062 139 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 76 IPR003958 -
Prci4g2062 139 FunFam Nuclear factor Y, subunit C13 1 91 - -
Prci4g2062 139 SUPERFAMILY Histone-fold 6 92 IPR009072 GO:0046982
Prci4g2062 139 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982
Prci4g2062 139 MobiDBLite consensus disorder prediction 101 139 - -
Prci4g2062 139 MobiDBLite consensus disorder prediction 85 139 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2062 4 127 CCAAT-HAP5 Transcription Factor Family AT5G43250 66.129 5.53e-50 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci4g2062 CBFD_NFYB_HMF 1.2e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2062 - - qsa:O6P43_023858 180.644