Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2036 ATGAGTTTGCTCTATGTAGTTGGATTTGGCCTAAAGTTGGGGCATCTTCTTTTGGCGTTGTGTTGCTGGATTGTATCAGTCATATACATGAACTGGTTCAACAACGGAGGAATTATGGAAACCAAGGTTGGTTTTCTCGGCGGTGGCGGCAAGATGTGGCTCAAGTGGTGGGAAAAGATCTCAGGCGATAGTTGTAAAATTCATCAACACTACTACCAGTGTATTGGGTCCAAGAAAGTTCGGAGAACTCTGTGGAGAAAGCTTTTGCTGACATGGGTACTGGGCTGGACCATGGTATCCTTGTGGATCTTTTGCTTCATGACCTTTCAAGCTACTGAGAAGAGGAAAGAGACTCTGGCGAGTATGTGTGATGAGAGGGCTAGGATGCTTCAGGATCAGTTTAATGTTAGTATGAACCATATCCAAGCCATGTCAATTCTCATCTCAACCTTTCACCATGCCAAGTCCCCTTCTGCCATCGATCAGAGAACATTTGCTAGGTACACAGAACGAACTGCTTTTGAGAGGCCCCTTACTAGTGGTGTTGCTTATGCTGTGAGAGTGCTTCATTCTGAAAGGGAACATTTCGAGAAGCAACAAGGTTGGACCATTAAGAGGATGGATACCCTTGAGCAGAACCCCATTCATGAGGATGACTATGCCCCTGAGGCATTGGAACCTTCCCCTGTTCGAGAAGAATACGCTCCTGTCATTTTTGCACAGGAAACAATTTCCCATGTCATTTCTGTCGATGTGCTTTCTGGAAAGGAAGATCGTGAAAATGTTTTGCGTGCTAGAGCATTAGGGAAGGGGGTTTTAACTGCTCCTTTTAGGCTGCTCAAAACAAATCATCTAGGAGTTATCCTGACATTCGCTGTATACAACACAGATCTTCCATCAAATGCAACCCCAAATGAAAGGATTCAAGCAACAAATGGGTATCTTGGTGGCGTCTTTGATATTGAGTCATTGGTTGAAAAGTTACTTCAGCAACTTGCTAGCAAGCAAACTGTGATTGTTAATGTGTATGATACTACTAATCATACCCACCCTATTTCCATGTATGGTTCAAATGTGTCAGATGATGGATTCTATCATGTCAGCTCCTTGAACTTTGGAGATCCTTTCCGGAAGCATGAGATGCACTGCAGGTTCAAACAGAAACCTCCATGGCCATGGTTGGCAATTGCTACATCAATTGGCATCCTTGTTATTGCACTCCTTGTAGGGCATATTTTTCACGCTACTGTGAATCGAATTGCTAAAGTGGAGGACGATTACCATGAGATGATGGAACTTAAAAAACGAGCTGAGGCAGCTGATGTTGCAAAATCACAGTTTCTGGCCACTGTTTCTCATGAGATCAGGACACCAATGAATGGTGTTCTTGGAATGTTGCATATGCTTATGGACACAGATCTAGATGTAACACAGAAAGAATATGTCAGAATAGCACAGGGTAGTGGGAAAGCTCTAGTGTCACTTATAAATGAGGTTTTGGACCAGGCAAAGATTGAATCTGGTAAGCTTGAGCTTGAGGCAGTGCTATTTGACATACGAGCAGTCTTGGATGATGTGTTGTCACTATTCTCTGAGAAATCTCAAGAAAAAGGAGTAGAGTTGGCAGTGTATATCTCAGATAAGGTTCCTGAACAGCTAGTTGGTGATCCAGGAAGGTTTCGGCAAATAATTACAAATCTTATGGGCAACTCAATTAAGTTCACAGACAAAGGGCACATATTTGTCACTGTCCATCTTATTGAGGAAGTTGTCAATTCAATTGAAGTTGCAACATCAGAGAATACCTTGAGCGGATTTCCTGTTGCTGATAGATGTCAAAGTTGGAAAGGATTCAGTTCCGTCAGTCAAGAGGGACATCAGGATTCTTTCTTATCCTCCTCCTCTGATCGCATTACTCTTATTGTTTCCGTTGAAGATACGGGTGAAGGAATTCCTCTAGAAGCCCAATCTCGCATCTTCACTCCATTCATGCAGGTTGGTCCATCTGTCTCCAGGAAATATGGAGGAACAGGTATTGGGCTAAGCATTAGCCAGTGCTTGGTTGGCCTCATGCACGGGGAAATTGGATTTGTGAGCATGCCAAAGATCGGATCTACCTTCACATTTACAGCTGTCTTCACCAATGAATCCCCTAGTTCAACTGAGGGTAAACCTCAGCAAATTAACAACCAACCTAACCTTGCATCCTCAGAATTTCAGGGCATGACTGCTCTTGTTATAGACCCTAGACCTGTTAGAGCTAATGTGTTGAGATATCACATTAAACGGCTTGGCATTCGTGTTGAAATAGCTCCAGATTTAAATCAAGGTTTGTCTGTCATAAGCAATGGGGATATAGTTATCAATATGATCCTTGTTGAACACGAAGTCTGGGATAGAGATTCTGGTATCTCATCTCAGTTTATGAATAACATGAAGAAAAATGATTGTGGGGTGCCTCCAAAGCTGTTTGTTCTTGTTAATTCTAGTAGCTTTTCCAAAACAAGTTCCATAACATTAGGTGTTCATAATCCAACTGTCATTGTAAAACCTCTGAGAGCAAGCATGCTTGCTGCTATGCTACAGCGAGCCATGGGTGTTGGAAACAAGGGGAATCCTCGAAATGGGGAGCTTCCAAGTTTGTCTCTCCGCCATCTTTTGCGTGGGAGAAAAATCCTTATTGTAGATGACAATAGTGTGAACCGAACAGTAGCAGCTGGAGCTTTAAAGAGGTATGGAGCTGATGTGGTCTGTGTTAACAGTGGAAAAGAAGCCATCTCTATGCTGAAGCCACCCCATCAATTTGATGCCTGTTTTATGGATATTCAAATGCCAGAAATGGATGGGTTTGAAGCTACCAAGAGGATTCGGGAGGTGGAACAAGAAACCATGGATAATACTTCAAACTGGCATATACCCATTTTGGCTATGACTGCTGACGTGATTCAGGCAACGCATGAGGAATGCCTAAGGTGTGAAATGGATGGATATGTTTCGAAACCATTTGAAGCTGAACAGCTTTATCGGGAAGTTTCACGGTTTTTCCAATCAACTTCATGA 3060 0.4281 MSLLYVVGFGLKLGHLLLALCCWIVSVIYMNWFNNGGIMETKVGFLGGGGKMWLKWWEKISGDSCKIHQHYYQCIGSKKVRRTLWRKLLLTWVLGWTMVSLWIFCFMTFQATEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSEREHFEKQQGWTIKRMDTLEQNPIHEDDYAPEALEPSPVREEYAPVIFAQETISHVISVDVLSGKEDRENVLRARALGKGVLTAPFRLLKTNHLGVILTFAVYNTDLPSNATPNERIQATNGYLGGVFDIESLVEKLLQQLASKQTVIVNVYDTTNHTHPISMYGSNVSDDGFYHVSSLNFGDPFRKHEMHCRFKQKPPWPWLAIATSIGILVIALLVGHIFHATVNRIAKVEDDYHEMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQKEYVRIAQGSGKALVSLINEVLDQAKIESGKLELEAVLFDIRAVLDDVLSLFSEKSQEKGVELAVYISDKVPEQLVGDPGRFRQIITNLMGNSIKFTDKGHIFVTVHLIEEVVNSIEVATSENTLSGFPVADRCQSWKGFSSVSQEGHQDSFLSSSSDRITLIVSVEDTGEGIPLEAQSRIFTPFMQVGPSVSRKYGGTGIGLSISQCLVGLMHGEIGFVSMPKIGSTFTFTAVFTNESPSSTEGKPQQINNQPNLASSEFQGMTALVIDPRPVRANVLRYHIKRLGIRVEIAPDLNQGLSVISNGDIVINMILVEHEVWDRDSGISSQFMNNMKKNDCGVPPKLFVLVNSSSFSKTSSITLGVHNPTVIVKPLRASMLAAMLQRAMGVGNKGNPRNGELPSLSLRHLLRGRKILIVDDNSVNRTVAAGALKRYGADVVCVNSGKEAISMLKPPHQFDACFMDIQMPEMDGFEATKRIREVEQETMDNTSNWHIPILAMTADVIQATHEECLRCEMDGYVSKPFEAEQLYREVSRFFQSTS 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2036 1019 ProSiteProfiles CHASE domain profile. 156 382 IPR006189 -
Prci4g2036 1019 Gene3D - 107 159 - -
Prci4g2036 1019 Gene3D - 507 717 IPR036890 -
Prci4g2036 1019 FunFam Histidine kinase 4 160 389 - -
Prci4g2036 1019 CDD HATPase_EvgS-ArcB-TorS-like 560 713 - -
Prci4g2036 1019 ProSiteProfiles Response regulatory domain profile. 743 865 IPR001789 GO:0000160
Prci4g2036 1019 CDD HisKA 443 504 IPR003661 GO:0000155|GO:0007165
Prci4g2036 1019 Gene3D CHASE domain 160 389 IPR042240 -
Prci4g2036 1019 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 428 509 IPR036097 GO:0000155|GO:0007165
Prci4g2036 1019 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 555 713 IPR003594 -
Prci4g2036 1019 SMART CHASE_2 156 357 IPR006189 -
Prci4g2036 1019 Gene3D - 411 506 - -
Prci4g2036 1019 FunFam Histidine kinase 4 415 506 - -
Prci4g2036 1019 ProSiteProfiles Histidine kinase domain profile. 450 715 IPR005467 -
Prci4g2036 1019 ProSiteProfiles Response regulatory domain profile. 891 1015 IPR001789 GO:0000160
Prci4g2036 1019 SMART REC_2 890 1011 IPR001789 GO:0000160
Prci4g2036 1019 Pfam His Kinase A (phospho-acceptor) domain 443 508 IPR003661 GO:0000155|GO:0007165
Prci4g2036 1019 SUPERFAMILY CheY-like 887 1015 IPR011006 -
Prci4g2036 1019 CDD REC_hyHK_CKI1_RcsC-like 892 1011 - -
Prci4g2036 1019 SUPERFAMILY CheY-like 738 866 IPR011006 -
Prci4g2036 1019 CDD PRTases_typeI 844 919 IPR000836 -
Prci4g2036 1019 PANTHER TWO-COMPONENT HISTIDINE KINASE 120 1008 - -
Prci4g2036 1019 Pfam CHASE domain 159 355 IPR006189 -
Prci4g2036 1019 Pfam Response regulator receiver domain 892 1010 IPR001789 GO:0000160
Prci4g2036 1019 Gene3D - 885 1018 - -
Prci4g2036 1019 PRINTS Bacterial sensor protein C-terminal signature 658 668 IPR004358 GO:0016310|GO:0016772
Prci4g2036 1019 PRINTS Bacterial sensor protein C-terminal signature 675 693 IPR004358 GO:0016310|GO:0016772
Prci4g2036 1019 PRINTS Bacterial sensor protein C-terminal signature 640 654 IPR004358 GO:0016310|GO:0016772
Prci4g2036 1019 SMART HisKA_10 443 508 IPR003661 GO:0000155|GO:0007165
Prci4g2036 1019 Coils Coil 420 440 - -
Prci4g2036 1019 SMART HKATPase_4 555 715 IPR003594 -
Prci4g2036 1019 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 497 710 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2036 Prci-Chr4 31404355 31410958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2036 1 1019 Miscellaneous Gene Families AT1G27320 68.190 0.0 1417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci4g2036 CHASE 3.1e-37 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2036 K14489 - gmx:100801546 1642.48