Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2032 ATGCAAACTGGTTACAACATTAATGATCTGTACCAAGAAGCTCAAACGCGATGGCTGAAGCCTGTAGAAGTGATGTATATTTTACAGAATCATGAACAGTGTCAGATTACCCAAGAGCCTCCTCAACAGCCACCCAGTGGATCCTTGTTTCTGTTTAACAAAAGAGTTCTGCGCTTTTTTCGTAGAGATGGCCATAATTGGCGGAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACACGAACGACTTAAGGTTGGAAATGTTGAAGCCTTAAATTGTTATTATGCACATGGAGAGCAGAACCCCACTTTTCAAAGGCGGAGCTATTGGATGTTGGATCCGGCTTGGGAGCATATTGTTCTGGTACATTACAGAGAAACAAGTGAGGGAAGGTCCAATTCTGGACCTGTCACACAACAGTCACCAGGATCCTCATCTACATTTAGTCAGAGTCCTAGCTCATACACCACCCAAAAGCTAGGGTCAACATCCATGTTTGGTGACTTGTATGACCCTAAGCAGAGTTTCTCTTGTCCTGGATCGGTAGAATTCACATCTGATATAGTCATCAAGAATAATGGAATAGATCACTTGGATGGAACAGAGGCAGAGTCAGGAAATTCAACTGGACTTGAGGTTACTCAAGCTGCCCTGCGCCGACTGGAGGAGCAGTTAAGTTTGAATGAGGACAGCTTAAAAGAAATTGATTCACTCAGCAGTGAGCAGGAGAGCACACATGACTCAAGCCCCGAACAAAATACAATGGCAATCAACAATCAAGATGTTACTGCAGCTTGGCCTGCACTGAGTGATGACGGCCAATCTTATGATGGATATAGTGCCAGACAAGACCATAATTTCTCTGATGGAAATGAGAAGACTTTTTACTGGAAGGAGATGCTAGTCTCATGTAAGCCCCCGTCCTCAGCCAATTTGCAAGAGAAACACATGTACAGACCTGCTGGAAATGAAAACTCACTTTCTTCTTCAGGAAGGTTACCAATTGCCAACGAGGAAAGCAGTTACTGGCTAGGCTTTGGCAGTAACAATGCTCAAAACTCTGCCTTTTCACTGACTCAAGACATTAGTGGAGTTAGAATTCCTCCATATTCTTCTATGGCAGAAACTCAAGAAGTTAATTTGGACTGTTATGTGTCATTGTTTGACCAAAACCAAATCGAAGCTCCTCTTGGTGTCGATTTAAGTTTGACTGTTGCACAAAAACAGAAGTTCACAATTAAGGAAGTATCTCCAGAATGGGGTTATGCTACTGAAGTGACGAAGGTTATCATTGTTGGATCATTTCTGTGTCATCCCACGAGTTCCAGCTGGGCTTGCATGTTTGGTGATGTTGAGGTTCCTGCTGAAATAATTCAGGATGGTGTGCTCCGTTGTGAAGCTCCATCTCACCTTCCTGGAAAGGTTACTCTCTGCATTACCTCTAGTAATCGGGAGTCCTGCAGTGAAGTTCGTGAGTTTGAGTATCGCAACAAGGATAGCTGCCCTCACTGCAATTCATTAGAAACAGAATCCACTAGAAGTCCTGAAGAGCTGTTATTGCTTGTTAGATTTGCGCAGATGATCCTTTCTGATTCTTCTATGACAGAATCTGGAAATTATGAACTGGGAAAACAGAAAGTTGATGATGATTCATGGGGCCATGTTATTGATGCTCTTCTAGTTGGCAGTGGAACTTCATCCCGTACTGTTGATTGGCTTCTTGAAGAGCTTCTAAAAGACAGGCTGCAGTTCTGGCTTTCTTCCAGATGCCACAAAATAAATGAAGAGACAGGCTCTTCTTTGTCCAAAAAGGAGCAGGGCATTATTCATATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAACCCTATTCTCAGCTGTGGTGTGAACATAAATTTCCGCGACATCAATGGATGGACTGCCTTGCATTGGGCTGCACGCTTTGGCAGGGAAAAAATGACTGCTTCTCTTATAGCTTCTGGTGCATTTGCTGGAGCAGTGACAGATCCAACTACCCAAGATCCAACTGGTAAAACTGCTGCTTCTATTGCAGCCAACAGTGGGCATAAGGGTCTGGCAGGTTATCTTGCGGAGGTATCTCTAACAAGCCATTTATCTTCCCTCACCCTGGAAGAAAGTGAGCTATCTAAAGGCTCTGCTGAGCTTGATGCAGAGTTAACTGTAAGTACTGTCTCCAAGGAGCATCTAACAGCCAGTGAAGATCAGATTTCACTTAAAGATACGCTTGCTGCTGTGCGTAATGCAGCTCAGGCAGCTGCACGTATACAGTCTGCTTTTCGTGCACACTCTTTTAGGAAAAGGAGAGAAGCTGCCATCTCTGCAGCAGGTATAATAGCTGGATATGGTATCAGTGATAACATTCACGAGCTTTCTGCCATGTCAAAACTTACCTTTCATAATTCACGTGATTACAATTCAGCTGCCATATCGATTCAGAAGAAATATCGAGGATGGAAAGGCCGCAAAGATTTTTTAGCATTACGCCAGAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAAGCTAGAAAGCATTACAAGATAATATGTTGGGTTGTTGGGTTCTTTGACAAGGCTGTGCTACGATGGAGGAGGAAAGGAGCTGGTTTACGAGGTTTTCGGCAGGAGAGAAACTCTACTGATGAAAATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTAGATGAAGCTGTTGAACAGGCTGTTTCACGGGTGTTGTCCATGGTTGATTCTCCAGATGCTCGTCAACAATATCATCGCATGCTTGAAAAGTTTCGTCAAGCTAAGGCTGAACTTGGCAGCACGAGTCAAGGAGTACCGTTATCAACTTTTCTGAATGATGCTTCCAATATGGAAGATGACAACTTAAATCAGTTTCCCTAG 2916 0.4362 MQTGYNINDLYQEAQTRWLKPVEVMYILQNHEQCQITQEPPQQPPSGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAWEHIVLVHYRETSEGRSNSGPVTQQSPGSSSTFSQSPSSYTTQKLGSTSMFGDLYDPKQSFSCPGSVEFTSDIVIKNNGIDHLDGTEAESGNSTGLEVTQAALRRLEEQLSLNEDSLKEIDSLSSEQESTHDSSPEQNTMAINNQDVTAAWPALSDDGQSYDGYSARQDHNFSDGNEKTFYWKEMLVSCKPPSSANLQEKHMYRPAGNENSLSSSGRLPIANEESSYWLGFGSNNAQNSAFSLTQDISGVRIPPYSSMAETQEVNLDCYVSLFDQNQIEAPLGVDLSLTVAQKQKFTIKEVSPEWGYATEVTKVIIVGSFLCHPTSSSWACMFGDVEVPAEIIQDGVLRCEAPSHLPGKVTLCITSSNRESCSEVREFEYRNKDSCPHCNSLETESTRSPEELLLLVRFAQMILSDSSMTESGNYELGKQKVDDDSWGHVIDALLVGSGTSSRTVDWLLEELLKDRLQFWLSSRCHKINEETGSSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMTASLIASGAFAGAVTDPTTQDPTGKTAASIAANSGHKGLAGYLAEVSLTSHLSSLTLEESELSKGSAELDAELTVSTVSKEHLTASEDQISLKDTLAAVRNAAQAAARIQSAFRAHSFRKRREAAISAAGIIAGYGISDNIHELSAMSKLTFHNSRDYNSAAISIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQARKHYKIICWVVGFFDKAVLRWRRKGAGLRGFRQERNSTDENEDEDILKVFRKQKVDEAVEQAVSRVLSMVDSPDARQQYHRMLEKFRQAKAELGSTSQGVPLSTFLNDASNMEDDNLNQFP 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2032 971 SMART CG_1_2 10 128 IPR005559 GO:0003677
Prci4g2032 971 Pfam Ankyrin repeats (3 copies) 619 698 IPR002110 GO:0005515
Prci4g2032 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 802 860 IPR027417 -
Prci4g2032 971 Gene3D - 811 857 - -
Prci4g2032 971 Gene3D Immunoglobulins 406 500 IPR013783 -
Prci4g2032 971 MobiDBLite consensus disorder prediction 127 159 - -
Prci4g2032 971 Gene3D - 563 699 IPR036770 -
Prci4g2032 971 FunFam Calmodulin-binding transcription activator 2 810 858 - -
Prci4g2032 971 SUPERFAMILY E set domains 412 496 IPR014756 -
Prci4g2032 971 CDD IPT 412 496 - -
Prci4g2032 971 FunFam Calmodulin-binding transcription activator 2 406 500 - -
Prci4g2032 971 Pfam IQ calmodulin-binding motif 813 831 IPR000048 GO:0005515
Prci4g2032 971 Pfam IQ calmodulin-binding motif 836 855 IPR000048 GO:0005515
Prci4g2032 971 SUPERFAMILY Ankyrin repeat 605 698 IPR036770 -
Prci4g2032 971 MobiDBLite consensus disorder prediction 234 253 - -
Prci4g2032 971 ProSiteProfiles IQ motif profile. 811 840 IPR000048 GO:0005515
Prci4g2032 971 Pfam CG-1 domain 13 126 IPR005559 GO:0003677
Prci4g2032 971 ProSiteProfiles Ankyrin repeat region circular profile. 637 662 - -
Prci4g2032 971 ProSiteProfiles IQ motif profile. 755 783 IPR000048 GO:0005515
Prci4g2032 971 Pfam IPT/TIG domain 412 495 IPR002909 -
Prci4g2032 971 ProSiteProfiles Ankyrin repeat profile. 637 669 IPR002110 GO:0005515
Prci4g2032 971 SMART iq_5 833 855 IPR000048 GO:0005515
Prci4g2032 971 SMART iq_5 754 776 IPR000048 GO:0005515
Prci4g2032 971 SMART iq_5 810 832 IPR000048 GO:0005515
Prci4g2032 971 Coils Coil 211 238 - -
Prci4g2032 971 ProSiteProfiles IQ motif profile. 834 858 IPR000048 GO:0005515
Prci4g2032 971 ProSiteProfiles CG-1 DNA-binding domain profile. 7 133 IPR005559 GO:0003677
Prci4g2032 971 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2032 Prci-Chr4 31350480 31360885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2032 5 971 CAMTA Transcription Factor Family AT1G67310 51.906 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Prci4g2032 CG-1 2.9e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2032 K21596 - gmx:100786880 1322.76