Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2010 ATGGCCGCCGGCGACCATCCCAATCCCAATCCCAATCCCTTCAACGCCAACGGCAACGCCCTCACCGCCAACATCCTCCTCACCATCACTCTTATCTTGTTCTTTCTCATCCTCCTCCTCATTTCCCTCCAGTTCTACGTCCGCTGGTACCTCCGCCGTGCCCGCCTCCGTCGACGCCAGCGCCGCCGTTCCTATCTCGTCTTCTACGTCGACTCCCTCACCCCTAACGCCTCCCAGCCCATCGGCCTCGATCCTTCTGTCATTCAGTCTCTTCCTGTCTTCGTTTATTCCGCCCACTCCGACCCCGCGGAATGCGCCGTGTGCTTGTCCGAGTTCCAAGAGAACGAATCGGGTCGGGTTTTGCCCAAATGTAACCACACTTTTCACGTCGAATGCATCGATATGTGGTTCCAGTCCCACTCAACCTGCCCGCTCTGTAGATCTTTGGTTGAACCCGTGCCGCCTGGGGACCGCCCCGGACCGGAAGTGGTGATTGATGTGCGCGAACCGGGTTCGAGTTCGGGGTGCCACCAGGATGGAGAAGAAGAGAACCGGAGCGGGCGGAGGCTCTGTAATTCGTTGTCTTCGGTTGGGTTGAGGCGGAAGCCTTCGTCTGTGGGTGTGACAGTTGACGTGCCATTGAGTATGAGTAGAAGCTTCGGGAGAGAGGCGGAGGGGTCGATGACGTCGCTTAGGTCACCGGGCGGTCGTTTACTATCGTTCAAGAGAATACTGAGCAGAGAGAGGAAAGCAAGTCCTCCATCCCCATCGTCGGAAAACTGTACCGCTGGATGCAGCTCCGTGACCCAGATAGAGACGAGTCATTGA 828 0.5761 MAAGDHPNPNPNPFNANGNALTANILLTITLILFFLILLLISLQFYVRWYLRRARLRRRQRRRSYLVFYVDSLTPNASQPIGLDPSVIQSLPVFVYSAHSDPAECAVCLSEFQENESGRVLPKCNHTFHVECIDMWFQSHSTCPLCRSLVEPVPPGDRPGPEVVIDVREPGSSSGCHQDGEEENRSGRRLCNSLSSVGLRRKPSSVGVTVDVPLSMSRSFGREAEGSMTSLRSPGGRLLSFKRILSRERKASPPSPSSENCTAGCSSVTQIETSH 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2010 275 CDD RING-H2_EL5-like 104 147 - -
Prci4g2010 275 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Prci4g2010 275 MobiDBLite consensus disorder prediction 251 275 - -
Prci4g2010 275 Pfam Ring finger domain 104 147 IPR001841 -
Prci4g2010 275 SMART ring_2 105 146 IPR001841 -
Prci4g2010 275 MobiDBLite consensus disorder prediction 247 275 - -
Prci4g2010 275 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 22 152 IPR044675 -
Prci4g2010 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 152 IPR013083 -
Prci4g2010 275 SUPERFAMILY RING/U-box 93 154 - -
Prci4g2010 275 FunFam RING-H2 finger protein ATL3 75 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2010 Prci-Chr4 30861946 30863145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2010 9 252 Rapid Response to Elicitors AT3G16720 43.866 6.74e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2010 - - pcin:129320593 228.794