Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2004 ATGGAATCCAAAAACGGAAAAGAAAAGAAAGGGCTGATCATCAAGACATGGGAGCGATGCAAATCCATAGGACGCGGCTGCAAAAATAAACGATACATGGCGATTGACCCAGTGGCGGGTCCGTTATGCAGAAACAAATCATGGCCCAACCTTGACGTCAAGGTGATCGAAGAAAAGCCAACGAAGAACAAGAAATCCCGTCAACGACAGGTTGCTCCAGAAGGTTGCTTTTCCGTCTATGTGGGGCCTGAGAGGCAGAGGTTTGTGATCAAGACGGAGTTTGCGAACCACCCTCTCTTCAAGATCTTGCTGGAAGAAGCAGAATCAGAGTATGGATATAACAGCCAAGGCCCTTTAATCCTTCCCTGCGATGTTCATATATTCCTCGATGTTCTGATGGAAATGGACCAAGGCGCTGAAGATCAAGAAATCCGCCAGGGCTGTGCTTTTGTGATGAAGCGTTCAAGCTCGTCATATCACCTTCTAACCCCATCTCGAATGCTCGCCATAAATCCCCTGTGA 522 0.477 MESKNGKEKKGLIIKTWERCKSIGRGCKNKRYMAIDPVAGPLCRNKSWPNLDVKVIEEKPTKNKKSRQRQVAPEGCFSVYVGPERQRFVIKTEFANHPLFKILLEEAESEYGYNSQGPLILPCDVHIFLDVLMEMDQGAEDQEIRQGCAFVMKRSSSSYHLLTPSRMLAINPL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2004 173 Pfam Auxin responsive protein 62 132 IPR003676 GO:0009733
Prci4g2004 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 65 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2004 Prci-Chr4 30517541 30518912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2004 72 128 Calmodulin-binding Proteins AT3G43120 54.386 4.65e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2004 K14488 - pvy:116131261 195.667