Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2001 ATGGGCTGTTTTTCGTGTTTCGATTCGAAGGAGGATGAGCAGCTCAATCCTCGGCAAGAAACCGATGATCGAACACAAGGCCACCCAGCTGCCTCCTCTCACATTTCCAGATTGCCGTCTGGAGCAGACAAGCTTCGCTCAAGAAGTAGTAATGGAGGATCCAAAAGGGAACTGCCTGCTCCTAAGGATGGGCCTGGCGTCCAAATTGCTGCCCAAACTTTCACTTTCCGTGAACTTGCAGCTGCCACTCAAAATTTTAGGCCAGAGTCCTTTATAGGGGAAGGTGGTTTTGGACGGGTGTATAAAGGACGTTTGGAAAGCACGGGTCAGGTTGTTGCTGTTAAACAATTAGATAGAAATGGTCTTCAGGGTAATCGAGAATTCCTAGTGGAGGTTCTCATGCTTAGTCTTCTACATCATCCTAACCTTGTGAATCTTATTGGTTACTGTGCTGATGGGGACCAACGTCTCCTTGTGTATGAGTTTATGCCGTTGGGATCATTGGAAGACCATCTTCATGATCTTCCCCCTGATAAGGAACCACTTGATTGGAACACTAGGATGAGAATTGCAGCCGGTGCAGCGAAAGGATTGGAATACTTGCATGACAAGGCAAATCCTCCAGTTATTTATAGGGACTTCAAGTCATCTAATATATTATTAGATGAAGGATTTCATCCAAAGCTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCGGTTGGTGATAAGTCGCACGTTTCCACCAGAGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCCATGACTGGACAACTGACCGTGAAGTCTGACGTCTACAGTTTCGGGGTAGTCTTCTTGGAGTTGATTACTGGTCGGAAAGCCATCGACAGTACCCAGCCTCATGGAGAACAGAACCTTGTTACATGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTTCAAAATTGGCAGATCCTCGGCTTCAGGGACGGTATCCCATGCGGGGTCTTTACCAGGCATTAGCTGTGGCATCAATGTGCATCCAAGAACAGGCTGCCACACGGCCACTGATCGGAGATGTGGTAACGGCTCTATCCTATCTGGCCAACCAGGCATACGACCCTAATGCATCCGGGCATGGTCACCGGGTTTTGGGTGACGATAAAAGGAACAGAGATGAAAGAGGTGGAAGGATATCCAGAAATGAGGACAGTGGAGGATCCGGACGCCGATGGGACCTCGAAGGGTCCGAGAAAGAGGACTCGCCACGAGAAACTGCGAGGATGTTAAACCGGGACCTAGATAGAGAACGTGCAGTGGCAGAAGCCAAGATGTGGGGAGAGAATTGGAGAGAAAAAAGACGGCAAAATGGGCAGGGCAATTTTGATGCTTCCAATGCATGA 1389 0.486 MGCFSCFDSKEDEQLNPRQETDDRTQGHPAASSHISRLPSGADKLRSRSSNGGSKRELPAPKDGPGVQIAAQTFTFRELAAATQNFRPESFIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMRIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQAYDPNASGHGHRVLGDDKRNRDERGGRISRNEDSGGSGRRWDLEGSEKEDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQNGQGNFDASNA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2001 462 CDD STKc_IRAK 92 360 - -
Prci4g2001 462 MobiDBLite consensus disorder prediction 371 429 - -
Prci4g2001 462 Gene3D Transferase(Phosphotransferase) domain 1 163 377 - -
Prci4g2001 462 PANTHER OS07G0668900 PROTEIN 3 372 - -
Prci4g2001 462 MobiDBLite consensus disorder prediction 442 462 - -
Prci4g2001 462 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Prci4g2001 462 MobiDBLite consensus disorder prediction 1 66 - -
Prci4g2001 462 SUPERFAMILY Protein kinase-like (PK-like) 70 358 IPR011009 -
Prci4g2001 462 FunFam Serine/threonine-protein kinase PBS1 60 162 - -
Prci4g2001 462 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2001 462 MobiDBLite consensus disorder prediction 376 429 - -
Prci4g2001 462 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Prci4g2001 462 Pfam Protein kinase domain 89 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2001 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Prci4g2001 462 MobiDBLite consensus disorder prediction 11 27 - -
Prci4g2001 462 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2001 Prci-Chr4 30419032 30424258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2001 1 363 Glycoside Hydrolase AT3G07070 65.014 2.86e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci4g2001 Pkinase 4.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2001 K13430 - tcc:18608901 856.284