Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1995 ATGGAGAAGGAGAAGAAAGTGAGTTTTGTGAGAAATGGCGAGCTCAGATTGCCACCTGGGTTTCGATTTCATCCAACAGACGAAGAACTTGTGGTTCAATACTTGAAGCGCAAGGTCTTGGCTTATCCTTTGCCAGCTTCAATCATTCCTGAGGTTCATGTCTGCAAATCAGACCCTTGGGACTTGCCAGGTCATATGGAACAGGAGAGATATTTCTTCAGTACCAGAGAAGCTAAGTACTCTAATGGAAGCCGATCTAACAGAGCCACACTTTCTGGGTATTGGAAGGCCACGGGTTTAGACAAGCAAATTTTGACTTCGAAACCCAACAACCATCAAGTCGTCGTTGGCATGAAGAAGACTCTGGTTTTCTACAAAGGCAAGCCTCCTCATGGCTCCAGAACCGACTGGATCATGCACGAGTATCGCCTCCATAATACACAGAGCTCTGTGGTGGGTATGCAGAACTGGGTACTGTGTCGTATATTCTTGAAGAGAAGAAATGGAAAGATGAGTACTGAAGAACAGAGCAATTTCAGAGTGAATAGAGACATGATGAACAAGTTAAGCTCAAGGCCTGTGTTCTATGATTTCTTATCACAGAGCAATAAGAATAACAATAATAATAGTAAGACTGATTTGAATCGGACACCTACCTCGTCGACCTCAAGCATAAGTGGAATCACGCATCTCTCTGGTTCTCATTCTCTTCACAACGAATCTGATGAGCGTGAAGAAGCAAGCAGTAGTTGCAACAGCTTACCGTCTCTTACAAGAAACCCGTGA 786 0.4402 MEKEKKVSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVLAYPLPASIIPEVHVCKSDPWDLPGHMEQERYFFSTREAKYSNGSRSNRATLSGYWKATGLDKQILTSKPNNHQVVVGMKKTLVFYKGKPPHGSRTDWIMHEYRLHNTQSSVVGMQNWVLCRIFLKRRNGKMSTEEQSNFRVNRDMMNKLSSRPVFYDFLSQSNKNNNNNSKTDLNRTPTSSTSSISGITHLSGSHSLHNESDEREEASSSCNSLPSLTRNP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1995 261 ProSiteProfiles NAC domain profile. 17 165 IPR003441 GO:0003677|GO:0006355
Prci4g1995 261 MobiDBLite consensus disorder prediction 199 235 - -
Prci4g1995 261 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 229 - -
Prci4g1995 261 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Prci4g1995 261 Gene3D NAC domain 26 170 IPR036093 GO:0003677|GO:0006355
Prci4g1995 261 MobiDBLite consensus disorder prediction 199 261 - -
Prci4g1995 261 Pfam No apical meristem (NAM) protein 18 144 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1995 Prci-Chr4 30201846 30203289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1995 7 254 NAC Transcription Factor Family AT5G13180 56.015 4.42e-93 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci4g1995 NAM 2.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1995 - - tcc:18608896 320.087