Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1967 ATGGTTTCCAGAAGATACAGTTCCTCATATTACACAAAGGAGTTATTTACTTTACTCTTGCTGTTCTTATTTAGCTTTCAGCACACCACTACTGTTCAGTGCCAGGGAAGGTTTAGTAAACAAAACTATTCAAGGTCTTCAGGAGACAGGGAAGACCTCCGCAAGATCATCATTAGTGTTGTTCTAGGAGCAGTCACTGGATTAGTTGGCTCAGTTTTGTTTGCTCTTATAGTCCGTTGCTTTGTTCAGTATTTGAATCGAATCCCAATTCTCAAGGGGCCTGTAATATTTTCCCCGAAAGTTTCTCCAAAGACACTGCAATCAGCTCTGGCAAAAGAAAACCATTTGCTTGGTTCAAGCCTAAACGGCAAATGTTACAAGACTGTGCTTGACAATGGGCTTACAATTGCAGTCAAGAGGTTAACACCCTTTGAAAGCGGTTCACCGGAGATTAGGAAAAGGAGGGTTAAGAGAGAGATACAGAAGGAACTGGAAGTGCTTGCTAGTCTGAGACATCGAAATTTGATGAGCTTAAGGGCCTATGTTCGTGAACCTGACAGTTTTTCATTGGTTTATGATTATGTGGCCGAGGGGAGCCTTGCTGATGCAATGAACAGAGCTAAGGAAAGTGAGTTGCCTCTTGGTTGGGAAATTAGGTTAAGGATTGCTATTGGGGTGGTTAAGGGGCTTCAGTATCTTCATTCTACTTGCGCACCTCAGATTCTGCACTACAACCTTAAGCCCACCAATGTAATGTTGGATGCTGAGTTTGAACCAAGGTTGTCAGATTATGGATTGATCAAGCTTCTACCCAACTTGAGTAGAGCCACATCTCCCTACACTCCTCCTGAATACTTTCATAACTGCAGGTACAGTGACAAAAGTGACATATTCAGTTTTGGGATGATCTTGGGTGTATTATTAACTGGAAAGGACCCAGGAGATACATTCTTTGGAGAAGCAGGAAATGGAGGGAGCATGGGATGTTGGTTAAGGCAGTTGCAGCAAGCAGGAGATGCCAAGGAAGCACTCGATAAGAGTATAATCGTGCGAGAAGGCGACGAAGATGATATGCTCATGGCTGTCAGAGTTGCCGCAGCATGCCTCTCAGATGTGCCGGCAGATAGGCCTTCAAGTGACGAACTCGTTCACATGCTAACGCAGCTTCACAGTTTTTGA 1179 0.4402 MVSRRYSSSYYTKELFTLLLLFLFSFQHTTTVQCQGRFSKQNYSRSSGDREDLRKIIISVVLGAVTGLVGSVLFALIVRCFVQYLNRIPILKGPVIFSPKVSPKTLQSALAKENHLLGSSLNGKCYKTVLDNGLTIAVKRLTPFESGSPEIRKRRVKREIQKELEVLASLRHRNLMSLRAYVREPDSFSLVYDYVAEGSLADAMNRAKESELPLGWEIRLRIAIGVVKGLQYLHSTCAPQILHYNLKPTNVMLDAEFEPRLSDYGLIKLLPNLSRATSPYTPPEYFHNCRYSDKSDIFSFGMILGVLLTGKDPGDTFFGEAGNGGSMGCWLRQLQQAGDAKEALDKSIIVREGDEDDMLMAVRVAAACLSDVPADRPSSDELVHMLTQLHSF 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1967 392 ProSiteProfiles Protein kinase domain profile. 111 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1967 392 Pfam Protein kinase domain 113 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1967 392 Coils Coil 153 173 - -
Prci4g1967 392 Gene3D Phosphorylase Kinase; domain 1 97 194 - -
Prci4g1967 392 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 30 388 - -
Prci4g1967 392 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 103 194 - -
Prci4g1967 392 Gene3D Transferase(Phosphotransferase) domain 1 195 391 - -
Prci4g1967 392 SUPERFAMILY Protein kinase-like (PK-like) 114 386 IPR011009 -
Prci4g1967 392 CDD STKc_IRAK 117 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1967 Prci-Chr4 29599218 29602669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1967 57 389 Receptor kinase-like Gene Family AT2G31880 32.768 1.27e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Prci4g1967 Pkinase 2.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1967 - - gmx:102664172 586.645