Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1964 ATGTTAATGGCTTTGGAGCAGCAATTATCACTGGGTCCGAATCCCAACCTCGTTGACGGCCAAACAGACAGAACGAGTAACGGCGTCGATGTCCGGCCGCCGTCCGTCGACGGCGGAGAGGATGGCGTTAAAGCGCCGAGGCTGCCTCGTTGGACGAGACAAGAGATTCTGGTGCTCATACACGGGAAGAGGGACGCGGAGAACCAAATTCGAGGGAGTCGCAGTGCGGGATTGCCTTTTGGGACGGGTCAACTGGAGCCGAAATGGGCTTCGGTCTCATCGTACTGCAAAAAGCATGGAGTGAACAGAGGACCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCTGGAGACTATAAGAAGATCAAGGAATGGGAATCTCAGATAAGGGACGATTCAGAATCGTTTTGGGTGATGAGAAACGATTTAAGGAGAGAGAGGAAATTGCCGGGATATTTCGATAAAGAGGTCTATGACATTCTCGATTCGGGATCGCAGGCGCCGGCGTTAGCTTTAGCTCTGGCACCGGCTCCTGCGACAGGAACTGCTCCGGTGGAAAAGGGGAAAGACAGCAAGGGAGTGGCGGCGGAGGAAGCCCAGGCTGATACGGAGCCACACTTGTACGATAGTCGGAGCGCCGCCGGAGAGGATGGCTTATTCTCGGATTTCGAACAGGAAGAGGCAGGAGTGAGTCCAAAAAAGGAAGCACCGAGGAAGGATGTCTCACCTCATTCGACGCCTGTTCCTGCACCTATTCCCATCTCAGAGAAGCAATATCAACCACTTCTGCGTGGCTGTCAAGTTGAAGGAAATGCTCAAGGTGTGAGCAATGACAAACAACAGCGAGGCTCAAATCCAGAATTGGGTTCTACATCTCAAGGAGGACGGAAGAGGAAGCGGTTGCCAACGATGGACGAGGAGGAAGAAATTCTGCAAAATCAATTGATCGATGTATTGGAAAGAAACGGGAAGATGCTAAGTGCCCAGCTCGAAGCTCAGAACGTAAATTTCCAGTTGGATAGGGAGCAGAGGAAAGACCATGCTAGTCACTTAGTAGCTGTTCTTGATAAGCTTGCAGATGCTCTAGGCAGAATAGCTGATAAATTATAG 1110 0.5135 MLMALEQQLSLGPNPNLVDGQTDRTSNGVDVRPPSVDGGEDGVKAPRLPRWTRQEILVLIHGKRDAENQIRGSRSAGLPFGTGQLEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDDSESFWVMRNDLRRERKLPGYFDKEVYDILDSGSQAPALALALAPAPATGTAPVEKGKDSKGVAAEEAQADTEPHLYDSRSAAGEDGLFSDFEQEEAGVSPKKEAPRKDVSPHSTPVPAPIPISEKQYQPLLRGCQVEGNAQGVSNDKQQRGSNPELGSTSQGGRKRKRLPTMDEEEEILQNQLIDVLERNGKMLSAQLEAQNVNFQLDREQRKDHASHLVAVLDKLADALGRIADKL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1964 369 MobiDBLite consensus disorder prediction 9 29 - -
Prci4g1964 369 MobiDBLite consensus disorder prediction 9 45 - -
Prci4g1964 369 MobiDBLite consensus disorder prediction 190 211 - -
Prci4g1964 369 ProSiteProfiles Myb-like domain profile. 50 116 IPR001005 -
Prci4g1964 369 MobiDBLite consensus disorder prediction 180 254 - -
Prci4g1964 369 Pfam Myb/SANT-like DNA-binding domain 50 139 IPR044822 -
Prci4g1964 369 MobiDBLite consensus disorder prediction 273 304 - -
Prci4g1964 369 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 27 369 - -
Prci4g1964 369 MobiDBLite consensus disorder prediction 227 241 - -
Prci4g1964 369 Gene3D - 51 121 - -
Prci4g1964 369 MobiDBLite consensus disorder prediction 273 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1964 Prci-Chr4 29560648 29563669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1964 23 207 Trihelix Transcription Factor Family AT3G25990 25.888 1.85e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci4g1964 Myb_DNA-bind_4 9.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1964 - - pcin:129308058 719.539