Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1943 ATGCTCTACAACGTTAATTACACGCTAAAATTGGAATGGCGCACTAATCCATATTTGACATGTTCAGAACTCTTCGAGCACTGCCATCTTCAAGACGCCTCCCCCCCCCCCTCATTTGAAAGGAAGCCAGGAATCCGCATTGATGACAAGAAAAGTCTTATTTTAACTCTACTCCTAACTTTAGGTTCCATTTCATTCATTTGCTTAGTGTTTGGGGCGTTTATTTTCTTCTTCTACAGGCGTCAAGTCTATTCATACACAAAGCTTTCTGAAAGTGCTAGCTTGAGGTTTACTGAGGATTGTACTTTACGAACATTTTCCTTTGATGAATTGGTGAACTCAACAGGAAACTTCAAAGAGGAGGTTGGCAGAGGATCTTTTGGAGTGGTTTATAAGGGTGCAATATGTGGATGTAACAGAAGCATTGCTGTGAAGAAACTAGATGTAGTTGTTGATGAAGGAGAGAGGGAATTTCAAGCTGAAATAACTGCAATTGCCCGAACTCATCATAGAAATCTTGTTCAGCTCATTGGTTATTGCATTGATGGTTCAAAAAAGCTTCTTGTATACCAATACATGAGCAACGGGTCATTAGCAGATTTTTTATTCAAAGCCGAGATGCGGTTGTCATGGAGACAGAGAGTCAAGATTGCATTGGATGTAGCAAGAGCCATTTTGTATCTCCATGAGGAGTGTGAAGTTTGTATTGTCCATTGCAACATTAAGCCCCAGAATATACTTATGGATGAAATGTGGACTGCAAAATTATCCGATTTTGGACTTGCAAGGCTAATAATGCCAGAACATTCAAGTTTTACTACTAGAAATGAGATAACAAGTGGTTACATGGCACCTGAATGGCAGAAAGATGCATCTACGACATCAGTAAAAGTTGACATCTATAGTTATGGTATGGTGCTGCTAGAGATCATCTGTTGCAGAAGGAATACAGATGTAAAGGCTTCCTCCACTGAGGAGATAATGCTTTCAAGTTGGGCATATAATTGCTTTGTGAGAGGGGAATTGAGTAAACTAGTAGTAGATGAAGATGTGGAATGGAACACAATGGAAAGAATGGTGAAGGTGGCATTGTGGTGTGTTCAGAAGGACCTATCTTTACGTCCTTCAATGAAGAATGTGATACTGATGTTGGAAGGGCTAAAACATATCCCAATTCCTCCATCGCCAACCCCTCTTGTTTGA 1203 0.4015 MLYNVNYTLKLEWRTNPYLTCSELFEHCHLQDASPPPSFERKPGIRIDDKKSLILTLLLTLGSISFICLVFGAFIFFFYRRQVYSYTKLSESASLRFTEDCTLRTFSFDELVNSTGNFKEEVGRGSFGVVYKGAICGCNRSIAVKKLDVVVDEGEREFQAEITAIARTHHRNLVQLIGYCIDGSKKLLVYQYMSNGSLADFLFKAEMRLSWRQRVKIALDVARAILYLHEECEVCIVHCNIKPQNILMDEMWTAKLSDFGLARLIMPEHSSFTTRNEITSGYMAPEWQKDASTTSVKVDIYSYGMVLLEIICCRRNTDVKASSTEEIMLSSWAYNCFVRGELSKLVVDEDVEWNTMERMVKVALWCVQKDLSLRPSMKNVILMLEGLKHIPIPPSPTPLV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1943 400 ProSitePatterns Protein kinases ATP-binding region signature. 122 146 IPR017441 GO:0005524
Prci4g1943 400 Pfam Protein kinase domain 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1943 400 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 193 392 - -
Prci4g1943 400 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 49 395 - -
Prci4g1943 400 Gene3D Phosphorylase Kinase; domain 1 80 192 - -
Prci4g1943 400 SUPERFAMILY Protein kinase-like (PK-like) 99 386 IPR011009 -
Prci4g1943 400 ProSiteProfiles Protein kinase domain profile. 116 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1943 400 Gene3D Transferase(Phosphotransferase) domain 1 193 391 - -
Prci4g1943 400 FunFam S-receptor-like serine/threonine-protein kinase 84 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1943 Prci-Chr4 29091685 29093177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1943 51 391 Receptor kinase-like Gene Family AT2G43690 36.705 1.47e-68 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci4g1943 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1943 - - pcin:129299073 718.768