Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci4g1942 | ATGGCGGCCATCGCATCAAAAATCTTCTTTTTGCTAGTGGCATGTTTTATATTTGGAAGAGCTGAAACAGTATTCGCTGAGTATATAACACTGAACTCCACTCTTTTCCCTAATATTCATCCCACTTCATGGCTTTCACAATCCGGTCGGTTTGCATTTGGCTTTTATCAACAATCTGGCTATGGCTTCAAAGTCGGAATTTGGCTGACTGGTGCGGAGAAAAAAATTGTATGGACTGCCCATCGTGATGATCCCCCTGTATCCTCTAAAGCAAGGCTTCAACTAACCATGAAAGGTCTTCTCTTGCAAACAGGTCAAAGGAAAGACAAGCTTATTGATCACAGTAACAATCAAATAGCTGTTTCCTTTGCCTCCATGCTTGATACTGGTAACTTCGTACTGTACGACAAAAACTCCAAGATGCTTTGGCAGAGTTTCAATTGCCCTACCGATACCATGTTAGGGGGTCAAAATCTACATCATGGGGATCAATTGCTCTCTAGCTCATCAGACACTAACCAATCATCAGGAAGATTTCAGCTCTTGATGCAGAACGACGGAAACCTTGTTTTGTATCCAGCATATTCAGCTAGTACAGCATCAGATGCCTATTGGGCCTCAGGTTCTTATTTTGATAGAACTAAAGTCAATTATTATTATCTTTATCTCAACAAGACAGGTCCTCGACCTCTGCGTGTCATAGATGGCAATAATTCCAACAGGGCTGCAATTTGGATAGCACATGATTGGTTAACTTTAGATAGTTCCCATCCTTCTTCCAACACCATTATTTATCGAGCAACTGTTGATCCTGATGGAATTTTTCGACTCTATGCTCATTTTGATGATGAAAGTGGCAAGCGTCAAGTTAGAAATTTGTGGTCAGCACTGGATAATCTGTGCAGCGTGAAGACGTTCTGTGGATTCAATAGCTATTGCACCTATAATGACAATCAACCCTACTGCGAGTGTCTTCCCGGAAATGACTTTATAGATCCAAGCAAGAAAAATCTTGGTTGCAAAACGAACTTCATAAAACCAGAATGTCAAGGTGGAAAAGAAAATGAAGCCTTGTATAAGATGAATAAATTGGGTGGGATGACCTTGAGTGGTATTCCTTATGCCGTGGAGATTGTTGAAGTCCGTGATGATTGCCGATCTTCTTGCTTGGAAGACTGCTATTGTGGAGCTGCGCTTTATGATGAGAGCAACAGGAATTGCGAGAAACAAGAGCTTCCATTAAGATATGTCATAAGAAAAATGGAAGAAGGGTCTTCCTCTTCCATATTATACTTAAAGGTGGGACTTAACAGCAGCCTCAAAAGCGGGAAGGACAAACCTCCACCTGAGCCAAAACCCATCACAAGAACAAGTAAAAAAGCCATTGTGTTGATTTTTATTATGATCTTCGGGTTTGCTATTATTTTGTGTTTTGTCGTTGCAACCTCTAGCCTTCTAATTTACAGGATTGGAGCTTTAAGTTACAAGAGGTTGCTAGGGATGGGAGATTTTGGTTTGAATGAAGGGGTTACTCTGAGGGTATTTTCATACAATGAGTTGAGAAAAGCAACAAATGGTTTTAGACAAGAGTTGGGTAAGGGTTCCTTTGGATCAGTTTACAAAGGAACTTTACACAAAGGAAGAAAGATGATTGCTGTGAAAAGACTAGAGAAGTTGATTGAAGAAGGTGAGAGAGAATTTCAAGCTGAAATGCAAGCCATTGGAAAAACCCACCATAGAAACCTAGTTCGCTTGATGGGATATTGTGCTGAGGGATCAAAAAGACTTCTAGTTTATGAGTTCATGAGCAATGGTTCCCTTGGAAATTTTATCTTTGGGGACAGCAGTTTACATCCAAATTGGGATCAGAAAAAAAGAATAGCACTGGACATTGCAAGAGGATTATTGTATCTGCATGAAGAGTGCGAGGCTCCTATCATTCATTGTGATATAAAGCCTCAAAATATTTTGATGGATGAGTTCTTGGTAGCTAAAATCTCAGATTTTGGCCTAGCAAAACTTCTAGTACCAGATCAAACAAGAACCTTCACTCAGGTCCGAGGGACAAGAGGATATGTAGCTCCAGAATGGAATAAGAACACTCCAATAACAGTGAAAGCGGATGTTTATAGCTATGGAATTATGCTTTTGGAAATTGTATTTTGTAGAAGAAGCATAGTGGTGAACACAATGAATCCAGAGCAAATTGTTTTGTCCAATTGGGTGTACAAGTGTTTTGTTCGGCGTGAGTTAAGCAAGCTGGTTCTTGGGGAAGAGGTGGACCAGACATTGTTAGAGAATATGGTGAAGGTGGGATTATGGTGTATTCAAGATGAACCATTTCTTCGACCATCAATGAAGTGCGTGGTGTTGATGCTTGAAGGAGTTACTGATGTGGCCATTCCTCCTTGTCCATCGTCTGCTAATTAA | 2430 | 0.4041 | MAAIASKIFFLLVACFIFGRAETVFAEYITLNSTLFPNIHPTSWLSQSGRFAFGFYQQSGYGFKVGIWLTGAEKKIVWTAHRDDPPVSSKARLQLTMKGLLLQTGQRKDKLIDHSNNQIAVSFASMLDTGNFVLYDKNSKMLWQSFNCPTDTMLGGQNLHHGDQLLSSSSDTNQSSGRFQLLMQNDGNLVLYPAYSASTASDAYWASGSYFDRTKVNYYYLYLNKTGPRPLRVIDGNNSNRAAIWIAHDWLTLDSSHPSSNTIIYRATVDPDGIFRLYAHFDDESGKRQVRNLWSALDNLCSVKTFCGFNSYCTYNDNQPYCECLPGNDFIDPSKKNLGCKTNFIKPECQGGKENEALYKMNKLGGMTLSGIPYAVEIVEVRDDCRSSCLEDCYCGAALYDESNRNCEKQELPLRYVIRKMEEGSSSSILYLKVGLNSSLKSGKDKPPPEPKPITRTSKKAIVLIFIMIFGFAIILCFVVATSSLLIYRIGALSYKRLLGMGDFGLNEGVTLRVFSYNELRKATNGFRQELGKGSFGSVYKGTLHKGRKMIAVKRLEKLIEEGEREFQAEMQAIGKTHHRNLVRLMGYCAEGSKRLLVYEFMSNGSLGNFIFGDSSLHPNWDQKKRIALDIARGLLYLHEECEAPIIHCDIKPQNILMDEFLVAKISDFGLAKLLVPDQTRTFTQVRGTRGYVAPEWNKNTPITVKADVYSYGIMLLEIVFCRRSIVVNTMNPEQIVLSNWVYKCFVRRELSKLVLGEEVDQTLLENMVKVGLWCIQDEPFLRPSMKCVVLMLEGVTDVAIPPCPSSAN | 809 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci4g1942 | 809 | Pfam | Protein kinase domain | 529 | 787 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci4g1942 | 809 | ProSiteProfiles | Protein kinase domain profile. | 525 | 796 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci4g1942 | 809 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 602 | 801 | - | - | |
Prci4g1942 | 809 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 41 | 805 | - | - | |
Prci4g1942 | 809 | FunFam | Serine/threonine-protein kinase | 149 | 290 | - | - | |
Prci4g1942 | 809 | ProSiteProfiles | Bulb-type lectin domain profile. | 30 | 147 | IPR001480 | - | |
Prci4g1942 | 809 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 72 | 209 | IPR036426 | - | |
Prci4g1942 | 809 | SMART | blect_4 | 26 | 149 | IPR001480 | - | |
Prci4g1942 | 809 | Gene3D | - | 28 | 148 | IPR036426 | - | |
Prci4g1942 | 809 | ProSiteProfiles | PAN/Apple domain profile. | 349 | 434 | IPR003609 | - | |
Prci4g1942 | 809 | SMART | serkin_6 | 525 | 782 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci4g1942 | 809 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 171 | 279 | IPR036426 | - | |
Prci4g1942 | 809 | FunFam | S-receptor-like serine/threonine-protein kinase | 503 | 601 | - | - | |
Prci4g1942 | 809 | SUPERFAMILY | Protein kinase-like (PK-like) | 510 | 794 | IPR011009 | - | |
Prci4g1942 | 809 | ProSitePatterns | Protein kinases ATP-binding region signature. | 531 | 554 | IPR017441 | GO:0005524 | |
Prci4g1942 | 809 | ProSiteProfiles | Bulb-type lectin domain profile. | 150 | 290 | IPR001480 | - | |
Prci4g1942 | 809 | CDD | STKc_IRAK | 531 | 795 | - | - | |
Prci4g1942 | 809 | Coils | Coil | 553 | 573 | - | - | |
Prci4g1942 | 809 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 646 | 658 | IPR008271 | GO:0004672|GO:0006468 | |
Prci4g1942 | 809 | Gene3D | Phosphorylase Kinase; domain 1 | 511 | 601 | - | - | |
Prci4g1942 | 809 | Gene3D | Transferase(Phosphotransferase) domain 1 | 602 | 800 | - | - | |
Prci4g1942 | 809 | Gene3D | - | 149 | 299 | IPR036426 | - | |
Prci4g1942 | 809 | PIRSF | SRK | 1 | 809 | IPR024171 | GO:0004674 | |
Prci4g1942 | 809 | Pfam | D-mannose binding lectin | 76 | 160 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci4g1942 | Prci-Chr4 | 29074774 | 29079210 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci4g1942 | 515 | 803 | Receptor kinase-like Gene Family | AT5G20050 | 42.395 | 1.57e-69 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Prci4g1942 | Pkinase | 4.6e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci4g1942 | - | - | pcin:129309635 | 1648.25 |