Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1941 ATGGCGGCCATCGCATCAAAAATCTTCTTTTTGCTAGTGGCATGTTTTATATTTGGAAGAGCTGAAACAGTATTCGCTGAGTATATAACACTGAACTCCACTCTTTTCCCTAATATTCATCCCACTTCATGGCTTTCACAATCCGGTCGGTTTGCATTTGGCTTTTATCAACAATCTGGCTATGGCTTCAAAGTCGGAATTTGGCTGACTGGTGCGGAGAAAAAAATTGTATGGACTGCCCATCGTGATGATCCCCCTGTATCCTCTAAAGCAAGGCTTCAACTAACCATGAAAGGTCTTCTCTTGCAAACAGGTCAAAGGAAAGACAAGCTTATTGATCACAGTAACAATCAAATAGCTGTTTCCTTTGCCTCCATGCTTGATACTGGTAACTTCGTACTGTACGACAAAAACTCCAAGATGCTTTGGCAGAGTTTCAATTGCCCTACCGATACCATGTTAGGGGGTCAAAATCTACATCATGGGGATCAATTGCTCTCTAGCTCATCAGACACTAACCAATCATCAGGAAGATTTCAGCTCTTGATGCAGAACGACGGAAACCTTGTTTTGTATCCAGCATATTCAGCTAGTACAGCATCAGATGCCTATTGGGCCTCAGGTTCTTATTTTGATAGAACTAAAGTCAATTATTATTATCTTTATCTCAACAAGACAGGTCCTCGACCTCTGCGTGTCATAGATGGCAATAATTCCAACAGGGCTGCAATTTGGATAGCACATGATTGGTTAACTTTAGATAGTTCCCATCCTTCTTCCAACACCATTATTTATCGAGCAACTGTTGATCCTGATGGAATTTTTCGACTCTATGCTCATTTTGATGATGAAAGTGGCAAGCGTCAAGTTAGAAATTTGTGGTCAGCACTGGATAATCTGTGCAGCGTGAAGACGTTCTGTGGATTCAATAGCTATTGCACCTATAATGACAATCAACCCTACTGCGAGTGTCTTCCCGGAAATGACTTTATAGATCCAAGCAAGAAAAATCTTGGTTGCAAAACGAACTTCATAAAACCAGAATGTCAAGGTGGAAAAGAAAATGAAGCCTTGTATAAGATGAATAAATTGGGTGGGATGACCTTGAGTGGTATTCCTTATGCCGTGGAGATTGTTGAAGTCCGTGATGATTGCCGATCTTCTTGCTTGGAAGACTGCTATTGTGGAGCTGCGCTTTATGATGAGAGCAACAGGAATTGCGAGAAACAAGAGCTTCCATTAAGATATGTCATAAGAAAAATGGAAGAAGGGTCTTCCTCTTCCATATTATACTTAAAGGTGGGACTTAACAGCAGCCTCAAAAGCGGGAAGGACAAACCTCCACCTGAGCCAAAACCCATCACAAGAACAAGTAAAAAAGCCATTGTGTTGATTTTTATTATGATCTTCGGGTTTGCTATTATTTTGTGTTTTGTCGTTGCAACCTCTAGCCTTCTAATTTACAGGATTGGAGCTTTAAGTTACAAGAGGTTGCTAGGGATGGGAGATTTTGGTTTGAATGAAGGGGTTACTCTGAGGGTATTTTCATACAATGAGTTGAGAAAAGCAACAAATGGTTTTAGACAAGAGTTGGGTAAGGGTTCCTTTGGATCAGTTTACAAAGGAACTTTACACAAAGGAAGAAAGATGATTGCTGTGAAAAGACTAGAGAAGTTGATTGAAGAAGGTGAGAGAGAATTTCAAGCTGAAATGCAAGCCATTGGAAAAACCCACCATAGAAACCTAGTTCGCTTGATGGGATATTGTGCTGAGGGATCAAAAAGACTTCTAGTTTATGAGTTCATGAGCAATGGTTCCCTTGGAAATTTTATCTTTGGGGACAGCAGTTTACATCCAAATTGGGATCAGAAAAAAAGAATAGCACTGGACATTGCAAGAGGATTATTGTATCTGCATGAAGAGTGCGAGGCTCCTATCATTCATTGTGATATAAAGCCTCAAAATATTTTGATGGATGAGTTCTTGGTAGCTAAAATCTCAGATTTTGGCCTAGCAAAACTTCTAGTACCAGATCAAACAAGAACCTTCACTCAGGTCCGAGGGACAAGAGGATATGTAGCTCCAGAATGGAATAAGAACACTCCAATAACAGTGAAAGCGGATGTTTATAGCTATGGAATTATGCTTTTGGAAATTGTATTTTGTAGAAGAAGCATAGTGGTGAACACAATGAATCCAGAGCAAATTGTTTTGTCCAATTGGGTGTACAAGTGTTTTGTTCGGCGTGAGTTAAGCAAGCTGGTTCTTGGGGAAGAGGTGGACCAGACATTGTTAGAGAATATGGTGAAGGTGGGATTATGGTGTATTCAAGATGAACCATTTCTTCGACCATCAATGAAGTGCGTGGTGTTGATGCTTGAAGGAGTTACTGATGTGGCCATTCCTCCTTGTCCATCGTCTGCTAATTGTCTAAGCAAAGGATCCAGTAGTGGACGGGAAAAGAGCCGAGCTAGGGGTTTGCTTGTGGGTTGTAAAGATCTACAACCCTTTCTTTTGAGCAAGTATATTATAATGTATTTAGGTTAG 2547 0.4048 MAAIASKIFFLLVACFIFGRAETVFAEYITLNSTLFPNIHPTSWLSQSGRFAFGFYQQSGYGFKVGIWLTGAEKKIVWTAHRDDPPVSSKARLQLTMKGLLLQTGQRKDKLIDHSNNQIAVSFASMLDTGNFVLYDKNSKMLWQSFNCPTDTMLGGQNLHHGDQLLSSSSDTNQSSGRFQLLMQNDGNLVLYPAYSASTASDAYWASGSYFDRTKVNYYYLYLNKTGPRPLRVIDGNNSNRAAIWIAHDWLTLDSSHPSSNTIIYRATVDPDGIFRLYAHFDDESGKRQVRNLWSALDNLCSVKTFCGFNSYCTYNDNQPYCECLPGNDFIDPSKKNLGCKTNFIKPECQGGKENEALYKMNKLGGMTLSGIPYAVEIVEVRDDCRSSCLEDCYCGAALYDESNRNCEKQELPLRYVIRKMEEGSSSSILYLKVGLNSSLKSGKDKPPPEPKPITRTSKKAIVLIFIMIFGFAIILCFVVATSSLLIYRIGALSYKRLLGMGDFGLNEGVTLRVFSYNELRKATNGFRQELGKGSFGSVYKGTLHKGRKMIAVKRLEKLIEEGEREFQAEMQAIGKTHHRNLVRLMGYCAEGSKRLLVYEFMSNGSLGNFIFGDSSLHPNWDQKKRIALDIARGLLYLHEECEAPIIHCDIKPQNILMDEFLVAKISDFGLAKLLVPDQTRTFTQVRGTRGYVAPEWNKNTPITVKADVYSYGIMLLEIVFCRRSIVVNTMNPEQIVLSNWVYKCFVRRELSKLVLGEEVDQTLLENMVKVGLWCIQDEPFLRPSMKCVVLMLEGVTDVAIPPCPSSANCLSKGSSSGREKSRARGLLVGCKDLQPFLLSKYIIMYLG 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1941 848 Pfam D-mannose binding lectin 76 160 IPR001480 -
Prci4g1941 848 Gene3D Transferase(Phosphotransferase) domain 1 602 800 - -
Prci4g1941 848 ProSiteProfiles Protein kinase domain profile. 525 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1941 848 PIRSF SRK 1 828 IPR024171 GO:0004674
Prci4g1941 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 171 279 IPR036426 -
Prci4g1941 848 ProSiteProfiles Bulb-type lectin domain profile. 30 147 IPR001480 -
Prci4g1941 848 Gene3D Phosphorylase Kinase; domain 1 511 601 - -
Prci4g1941 848 SMART blect_4 26 149 IPR001480 -
Prci4g1941 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 208 IPR036426 -
Prci4g1941 848 FunFam Serine/threonine-protein kinase 149 290 - -
Prci4g1941 848 ProSiteProfiles PAN/Apple domain profile. 349 434 IPR003609 -
Prci4g1941 848 SMART serkin_6 525 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1941 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 801 - -
Prci4g1941 848 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 806 - -
Prci4g1941 848 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Prci4g1941 848 Gene3D - 28 148 IPR036426 -
Prci4g1941 848 Gene3D - 149 299 IPR036426 -
Prci4g1941 848 ProSiteProfiles Bulb-type lectin domain profile. 150 290 IPR001480 -
Prci4g1941 848 CDD STKc_IRAK 531 795 - -
Prci4g1941 848 FunFam S-receptor-like serine/threonine-protein kinase 503 601 - -
Prci4g1941 848 Coils Coil 553 573 - -
Prci4g1941 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Prci4g1941 848 SUPERFAMILY Protein kinase-like (PK-like) 510 794 IPR011009 -
Prci4g1941 848 Pfam Protein kinase domain 529 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1941 Prci-Chr4 29072120 29079210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1941 515 803 Receptor kinase-like Gene Family AT5G20050 42.395 2.09e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci4g1941 Pkinase 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1941 - - pcin:129309635 1716.82