Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1939 ATGGCTTCCATTACTCTGTTCTTGCTGTTTGCACTGCTATTTGCAAACACAGTTACAAATCAACAAAACCATTCCACCTTCATAAGTTTGGGCTCATCGATCTCCCCAAAAAACTCTACTTCGTGGGTGTCGCCCTCTGGTCTCTTTACCTTCGGCTTTTATCCACAAGGTAACGGCTTTGCCGTTGAGATATGGCTTAAGGGTGAACCTCAAAACACCACCGTTTGGACGGCTAAGCGTGACGATCCACCCGTGTCCTCTGATTCTATCGTCTACTTAACCGTAGACGGTCTGATGCTGCTTCGAAGAAAGGAAGACAATGAATTACTCACTGACAATGTGTCAATGCCGCCTGTAGCTTCAGCATGTATGCTTGATTCTGGGAATTTTGTGCTTTACAATGAAAGTCATAGTGTTATCTGGCAAAGCTTTGACTTCACCACTCACACCTTATTAGGAGGTCAGAATTTTTCTTATTATGATACACTGATCTCTGCCTTGTCCAATTCAGATCACTCAAGTGGATATTTTGCTCTCTGTATGGATTATGACGGAAATCTTACTGCTTACCCAATGTCATATGAATCGAATGTTTACTGGAGCACAAATGCTCTCTTGAAATATGGGATTTCAACCATACCCAAGTTTTATGTTGTGGCCAATAGCACCTCCTATGTTGCAAAGAATGCAACCTTAGTCTACCGAGCAACACTCCATGTGGATGGGAATTTTAGATTTTATTGCTCAAAAAATGGCACCAAATCTGTTTGTCAATGTTATCCTGGATTCGTACAGTTCAAAAGTGATAATAACATGTTCCTGGAATGCAAACGGACGAGGAATGAAACCAATGATGATCTAATGTTGCTCTACGATGTTATTACTTTGCCCGACATGAACTGGAGCACTCCTCCTTATTTGGCTATGCCATTGAACTTGAAAGCTTGTGAAAAGTCTTGCAAGGAAGACTGGGATTGTCGGGCAGCATTTTATACAAGTGGAAGTTGCAAGAAATATAAGCTTCCTCTTAGATTTGGAAGAATTGTTCACAATGAATCAGGCATTGCCATCTTGAAGTTGCCTATAGGAACTAAAGCCCCTCCAAACATCACCACCCCATCTGGAGGGAAATCGATCCTTGTTGATGACAAAAAAAGTTTGATTTTGACTCTCATCCTAACTTTGGGTTCAATTTCATTTGTCTGCTTTGTCGCTGCATTATCTATTTTCTTCATCTACAAGCATCAAGTCTCTTTGTACACAAAGTTGTCTACAAATGAGAATCTAGGATTCACTGAGGATTATAGTTTGCGAACATTTTCATTTGATGAATTGGTGAACTCAACAGGAAACTTTAAAGAAGAGGTTGGCAAAGGATCTTTTGAAACAGTTTATAGAGGTACAATACATGGGAGTAACAAAAGGGTTGCTGTGAAGAAGCTAGATGTCCTTGATGAAGGAAATTTGGTTCAACTCCTTGGCTATTGCATTGATGGTTCCAGAAAGCTTCTTGTTTATGAATATATGAGCAATGGGTCACTAGCAGATTTCCTGTTCAAGGCCGAGATGCACCTATCATGGAGAGAAAGAGTCAAAATCGCATTCGATGTAGCAAGAGGAGTTTTGTATCTACATGAAGAGTGTGAAGTTTGTATTGTCCATTGCAATATCAAACCTCAAAACATACTCATGGATGAAATGTGGACAGCAAAAGTATCTGATTTTGGACTTGCAAGGCTATCAATTCCAGAACATTCAAGAACTACATCTGCAAATGAATCAACAAGTGGCTATGTGGCACCTGAAGGACAAAAAGATGCATTAGCATCTGTAAAAGTTGATGTCTATAGTTATGGTGTGGTGCTATTGGAGATTATATGTTGTAGAAGAAATATAGACGTTAAGGTCTCCTCAGAAGAGGAAATTATGCTTTCAACTTGGGTGTACAATTGCTTTGTGAGAGGAGAATTGAATAAATTAGCAGTAGATGATGAAGATGTAGAATGGAAGACAATGGAAAGAATGGTGAAGGTGGGGTTATGGTGCATCCAGGAAAATTTATCTTTACGTCCGTCAATGAAGAATGTGATATTGATGTTGGAAGGGTTAAAAGATATTCCAACTCCTCCATGTCTAGCTCCTCTTGTTGGATAA 2154 0.3969 MASITLFLLFALLFANTVTNQQNHSTFISLGSSISPKNSTSWVSPSGLFTFGFYPQGNGFAVEIWLKGEPQNTTVWTAKRDDPPVSSDSIVYLTVDGLMLLRRKEDNELLTDNVSMPPVASACMLDSGNFVLYNESHSVIWQSFDFTTHTLLGGQNFSYYDTLISALSNSDHSSGYFALCMDYDGNLTAYPMSYESNVYWSTNALLKYGISTIPKFYVVANSTSYVAKNATLVYRATLHVDGNFRFYCSKNGTKSVCQCYPGFVQFKSDNNMFLECKRTRNETNDDLMLLYDVITLPDMNWSTPPYLAMPLNLKACEKSCKEDWDCRAAFYTSGSCKKYKLPLRFGRIVHNESGIAILKLPIGTKAPPNITTPSGGKSILVDDKKSLILTLILTLGSISFVCFVAALSIFFIYKHQVSLYTKLSTNENLGFTEDYSLRTFSFDELVNSTGNFKEEVGKGSFETVYRGTIHGSNKRVAVKKLDVLDEGNLVQLLGYCIDGSRKLLVYEYMSNGSLADFLFKAEMHLSWRERVKIAFDVARGVLYLHEECEVCIVHCNIKPQNILMDEMWTAKVSDFGLARLSIPEHSRTTSANESTSGYVAPEGQKDALASVKVDVYSYGVVLLEIICCRRNIDVKVSSEEEIMLSTWVYNCFVRGELNKLAVDDEDVEWKTMERMVKVGLWCIQENLSLRPSMKNVILMLEGLKDIPTPPCLAPLVG 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1939 717 Gene3D Phosphorylase Kinase; domain 1 436 484 - -
Prci4g1939 717 Pfam Protein tyrosine and serine/threonine kinase 453 697 IPR001245 GO:0004672|GO:0006468
Prci4g1939 717 ProSiteProfiles Protein kinase domain profile. 450 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1939 717 Pfam D-mannose binding lectin 73 158 IPR001480 -
Prci4g1939 717 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 204 IPR036426 -
Prci4g1939 717 Gene3D Phosphorylase Kinase; domain 1 485 509 - -
Prci4g1939 717 PIRSF SRK 242 716 IPR024171 GO:0004674
Prci4g1939 717 PIRSF SRK 1 252 IPR024171 GO:0004674
Prci4g1939 717 Gene3D Transferase(Phosphotransferase) domain 1 510 710 - -
Prci4g1939 717 Gene3D - 22 146 IPR036426 -
Prci4g1939 717 SMART blect_4 33 147 IPR001480 -
Prci4g1939 717 ProSiteProfiles Bulb-type lectin domain profile. 27 145 IPR001480 -
Prci4g1939 717 Gene3D - 162 256 IPR036426 -
Prci4g1939 717 SUPERFAMILY Protein kinase-like (PK-like) 432 701 IPR011009 -
Prci4g1939 717 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 509 708 - -
Prci4g1939 717 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 33 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1939 Prci-Chr4 28930040 28932601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1939 382 716 Receptor kinase-like Gene Family AT5G10530 33.973 3.07e-54 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci4g1939 PK_Tyr_Ser-Thr 9.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1939 - - pcin:129308930 1436.78