Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1938 ATGTTCTTGGACTGCAAACAAATCAACAATGACATCTGTGAAACCAGTTCAGATCCACAGGTGCTCTACAACGTTACTTACATGACAAAGTTGCAATGGAGAACTTCTCCATATTTGGTTATGCCATCAGAAAGGGAAGCTTGTGAAATGTCTTGCCTGGAAGATTGCAATTGTGGGGCGGCGCTATATAAGAATGGCAGTTGTGAGAAATATAAGCTCCCGCTTCAATATGGCAGACATAATGTTCAGAACGCTTCAGGCACTGCCATCTTCAAGACGCCTTTAAGAAATAAAACCACTACGGACTACCCTATCTCATTTGAAAGGAAATTTCACATTGATGACAAGAAAAGTCTTATTTTAACTCTACTCCTGACTTTGGGTTCCATTTCATTCATTTCCTTAGTGTTTGCGATGTCTATTTTCTTTTTCTACAAGCATCAAGTCTATTCATACACAAAGCTTTCTGAAAGTGCCAATCTGATGAGGTTTAATGAGGATTGTTGTTTACGAACATTTTCCTTTGATGAATTGGTGAACTTAACAGGAAACTTTGAAGAAGAGATTGGTAGAGGATCTTTTGGAATAGTTTATAAGGGTGCAATATGCGGATGTAACAAAAGGATTGCCGTGAAGAAATTAGATGTAGTTGTTGATGAAGGGGAGAGGGAGTTTCAAGCTGAAATAACTGCAATTGGCCGAACTCATCATAGAAATCTTGTTAAGCTCATTGGTTATTGCATTGAGGGTTCAAACAAGCTTCTTGTCTATGAATATATGAGCAATGGGTCATTAGCAGATTTTTTATTCAAAGCTGAAATGCGCTTGTCATGGGGACAAAGAGTCAAGATTGCATTGGATGTAGCAAGAGCCATTTTGTATCTCCATGAGGAGTGTGAAGTTGTATTGTCCATTGCAATATTAAGCCACATAATATACTTATGGATGAAATGTGGACTGCAAAATTATCTGATTTTGGACTTGCAAGGCTAG 993 0.3817 MFLDCKQINNDICETSSDPQVLYNVTYMTKLQWRTSPYLVMPSEREACEMSCLEDCNCGAALYKNGSCEKYKLPLQYGRHNVQNASGTAIFKTPLRNKTTTDYPISFERKFHIDDKKSLILTLLLTLGSISFISLVFAMSIFFFYKHQVYSYTKLSESANLMRFNEDCCLRTFSFDELVNLTGNFEEEIGRGSFGIVYKGAICGCNKRIAVKKLDVVVDEGEREFQAEITAIGRTHHRNLVKLIGYCIEGSNKLLVYEYMSNGSLADFLFKAEMRLSWGQRVKIALDVARAILYLHEECEVVLSIAILSHIIYLWMKCGLQNYLILDLQG 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1938 330 Gene3D Transferase(Phosphotransferase) domain 1 260 318 - -
Prci4g1938 330 ProSitePatterns Protein kinases ATP-binding region signature. 189 213 IPR017441 GO:0005524
Prci4g1938 330 Pfam Protein tyrosine and serine/threonine kinase 185 298 IPR001245 GO:0004672|GO:0006468
Prci4g1938 330 ProSiteProfiles Protein kinase domain profile. 183 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1938 330 SUPERFAMILY Protein kinase-like (PK-like) 170 297 IPR011009 -
Prci4g1938 330 FunFam S-receptor-like serine/threonine-protein kinase 151 259 - -
Prci4g1938 330 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 300 - -
Prci4g1938 330 Gene3D Phosphorylase Kinase; domain 1 146 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1938 Prci-Chr4 28717881 28719700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1938 116 303 Receptor kinase-like Gene Family AT2G43700 39.175 4.16e-33 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci4g1938 PK_Tyr_Ser-Thr 1.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1938 - - pcin:129310064 648.277