Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1895 ATGGCAGCAGTACCTTCTGAGCTTAGCCTGGATTGCAAACTCCACCATAGCTTTTCCATGCTTCTGATGAAATCCTTTCCAGATCATCACACTGATCAGACTCATCACAACCGCAAGCTCGAAGAATTCGTTTCTCGCCTCCAAGAAGAACGTCTCAAGATTGATGCCTTCAAGCGCGAACTTCCTCTCTGCATGCAACTTCTCACCAACGCTATGGAGGAGTCAAGGCAGAAACTTGAGGCTTTGAGAGGAAATGAAGACAAGAAAAGTGCAGTTCTGGAAGATTTCATACCGTTAAGGAATTCAAATTCTGAAAGCTCTGAGAAAGCATCGAGCACATGTGATAAGGCAAATTGGATGATATCTGCTCAGCTATGGAGCCAAGCTAATGAAGAAACCAAGCCACAATATTCCACAATTGCATCGCCCAATCATAAAGGTCAATCTGTTCATGATCAGATTGCTGGGTTAACGTTCAATGTTAGCCCTAATAAGCTACACAAAAATATTAGTGGAGGAGCCTTCCTTCCATTCTCAAATGAACGAATTAGCTCGAACCAGTGTCCTTCGTCGACGCCATTGCAGGCTCTTCCGGAGCTGGCACTTACTACTTCTCCTGATGGGAAACAAATAATGGAGGATGAGAAATTATACTCACAGACTGAGAATTCTAGTAAAGGAGGAAGAAGCAGTAATAATGGTGGTGTGGTGAGTGATCAACGAAAAAGGATTATTACAGTTTTGTGTGAGGTAAAAACAACCAGTAAAACTGCTTCAACGACGTCCACCACGCAGAGTCATCGGAAAGCAAGAAGGTGTTGGTCGCCGGACTTACACCGGCGATTTGTGAATGCTCTTCAGATGCTTGGCGGATCTCAAGTGGCCACCCCAAAACAAATTAGGGAGCTGATGAAGGTTGACGGATTGACCAATGATGAAGTTAAAAGTCATCTCCAGAAATATCGGCTTCACACAAGACGACCTGGTCAACAGTCACAAGCAGGTGGGGCAGTAACACCTCAACTCGTAGTCTTAGGAGGAATTTGGGTCCCACCCCCAACAGGCACCACTAACGCGCTCTTTAGCTCTCACCCAGTCCCTCACGAGCCGCCACAACCTTACTTCCCTTCCGCCGCTCCGCCGCATGACTCGTACACCATCACAACACTGCAATCACACAATCACACCTTCCACCACCACTACCATCACCACAATCTCAACGGTACAAAACGACGTCGCAGAGCCTGA 1248 0.4655 MAAVPSELSLDCKLHHSFSMLLMKSFPDHHTDQTHHNRKLEEFVSRLQEERLKIDAFKRELPLCMQLLTNAMEESRQKLEALRGNEDKKSAVLEDFIPLRNSNSESSEKASSTCDKANWMISAQLWSQANEETKPQYSTIASPNHKGQSVHDQIAGLTFNVSPNKLHKNISGGAFLPFSNERISSNQCPSSTPLQALPELALTTSPDGKQIMEDEKLYSQTENSSKGGRSSNNGGVVSDQRKRIITVLCEVKTTSKTASTTSTTQSHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPGQQSQAGGAVTPQLVVLGGIWVPPPTGTTNALFSSHPVPHEPPQPYFPSAAPPHDSYTITTLQSHNHTFHHHYHHHNLNGTKRRRRA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1895 415 Coils Coil 65 85 - -
Prci4g1895 415 NCBIfam myb-like DNA-binding domain, SHAQKYF class 269 324 IPR006447 GO:0003677
Prci4g1895 415 MobiDBLite consensus disorder prediction 218 237 - -
Prci4g1895 415 Pfam Myb-like DNA-binding domain 271 322 IPR001005 -
Prci4g1895 415 FunFam Myb family transcription factor 268 326 - -
Prci4g1895 415 SUPERFAMILY Homeodomain-like 267 327 IPR009057 -
Prci4g1895 415 Gene3D - 268 326 - -
Prci4g1895 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 266 326 IPR017930 -
Prci4g1895 415 MobiDBLite consensus disorder prediction 221 237 - -
Prci4g1895 415 Coils Coil 40 60 - -
Prci4g1895 415 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 22 369 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1895 Prci-Chr4 25811983 25814843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1895 3 352 G2-like Transcription Factor Family AT2G03500 51.934 1.53e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci4g1895 Myb_DNA-binding 8.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1895 - - pcin:129309792 773.852