Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1893 ATGGGATCCTATGATCCATCAGGCGGCGCCGCCTCCTCCAATGGTAGTTCCTCGAGCTCTGGAACCAAGCCGGCGGAGATGGATGGTCTTCTAGCCGGCGCTGGATACAAGGTCAAGTCGTCGGAGCTCCGTCGAGTGGCTCGACGTCTTGAACGACTTGAGAATGTCATGGTCAACGCCGCTGACATTTCTCAACTTGCTTCCGATACCGTACACTACGACCCCTCGGATATCAGTTCTTGGATTGACACTCTTCTTACCGAATTGAACCAGACCGTTTCTCTGCCGTGTGATCTGTTGGAGTTGCCGGATCTCCCAACTTGTCCGTTGCTGGAAGAAACCACTGTTGATAATCGCTGGGTCATGGCTCAGAATGATCAGAGCCACCATAGCTTCACTCCTCAGACGCAGCAATTTCAGCAATTGACGGTGGTGACATCGATGGAAGAAAACTCCGGGATAAGGCTGGTCCACATGTTGATGACCTGTGCGGATTCTCTTCAACGTGGCGAGCTAGCTCTTGCCGGCTCGCTTCTCGAGGACATGCAGGGTTTGTTGGCGCACGTGAACACCAGCTGTGGCATCGGAAAAGTCGCCGGATACTTCATCGATGCCCTCAGCCGCCGGATCTTCGCGCCACGGACCATTGGCACTGGCTCCTCCTGCACCTGTTCGCCTTTTGAGGACGAGGTTTTGTACCATCACTATTACGAGGCTTGCCCTTACCTCAAGTTCGCTCACTTCACGGCGAACCAAGCCATCCTCGAAGCCTTTAACGGCCACAATTGCGTCCATGTGATCGACTTTAACCTCATGCACGGGCTCCAGTGGCCGGCCTTGATTCAAGCTCTGGCCCTCCGTCCTGGTGGGCCCCCCTTACTGAGGTTGACTGGCATTGGTCCGCCTTCTCCGGACGGCCGCGACACCCTCCGCGAAATTGGGCTGCGACTCGCTGAGTTAGCGCGCTCCGTAAACGTCCGATTTGCCTTCCGTGGAGTCGCAGCTTCCAGACTCGAAGACGTCAAACCATGGATGCTCCAGGTAAGCCCGAAAGAAGCAGTGGCGGTGAATTCCATCATGCAGCTTCACCGCCTCCTTGGATCTGACCCGACAAGAGAACCCGTTATCCAATCCGTCCTTAGCTGGATCCAAAGCTTGAACCCGAAAATCATGACAGTGGTGGAACAAGAAGCGAATCACAACCAACCCGGGTTCTTAGACCGGTTCACAGAAGCTCTGTACTACTACTCCACCTTGTTCGACTCGTTGGAGGCTTGCTCGCTCCAGCCGGATAAAGCCTTAGCCGAGATATACATCCAGAAGGAGATATGCAATGTGGTGTGCTGTGAGGGATCGGCTCGCGTGGAGAGGCACGAGCCGCTGGGTAAGTGGAGAGATCGGCTCACTAAAGCCGGCTTTAGGGCTCTACGCTTAGGATCAAATGCTTTCAAGCAAGCTAGCATGCTGTTAACTCTGTTCTCAGCTGAAGGTTATTGTGTGGAAGAAAACGAAGGATGTTTGACTTTGGGCTGGCATAGCCGACCCCTCATTGCTGCTTCGGCTTGGCAAGCCGCGCCAGAGTATGGAGTAGCTTAA 1596 0.5445 MGSYDPSGGAASSNGSSSSSGTKPAEMDGLLAGAGYKVKSSELRRVARRLERLENVMVNAADISQLASDTVHYDPSDISSWIDTLLTELNQTVSLPCDLLELPDLPTCPLLEETTVDNRWVMAQNDQSHHSFTPQTQQFQQLTVVTSMEENSGIRLVHMLMTCADSLQRGELALAGSLLEDMQGLLAHVNTSCGIGKVAGYFIDALSRRIFAPRTIGTGSSCTCSPFEDEVLYHHYYEACPYLKFAHFTANQAILEAFNGHNCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDTLREIGLRLAELARSVNVRFAFRGVAASRLEDVKPWMLQVSPKEAVAVNSIMQLHRLLGSDPTREPVIQSVLSWIQSLNPKIMTVVEQEANHNQPGFLDRFTEALYYYSTLFDSLEACSLQPDKALAEIYIQKEICNVVCCEGSARVERHEPLGKWRDRLTKAGFRALRLGSNAFKQASMLLTLFSAEGYCVEENEGCLTLGWHSRPLIAASAWQAAPEYGVA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1893 531 ProSiteProfiles GRAS family profile. 147 523 IPR005202 -
Prci4g1893 531 MobiDBLite consensus disorder prediction 1 26 - -
Prci4g1893 531 Pfam Transcriptional regulator DELLA protein N terminal 28 92 IPR021914 -
Prci4g1893 531 Gene3D - 26 89 IPR038088 -
Prci4g1893 531 Coils Coil 36 63 - -
Prci4g1893 531 Pfam GRAS domain family 156 523 IPR005202 -
Prci4g1893 531 SMART DELLA_2 28 99 - -
Prci4g1893 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 519 IPR005202 -
Prci4g1893 531 FunFam DELLA protein GAI 26 89 - -
Prci4g1893 531 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1893 Prci-Chr4 25730221 25732119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1893 27 523 GRAS Transcription Factor Family AT1G14920 49.328 5.00e-166 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci4g1893 GRAS 6.6e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1893 K14494 - qsa:O6P43_002319 781.941