Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1887 ATGAGAGGAAGCAGAAACAGAGGGGTATTTGGTGTAGGTGTATGCGGTCAAGAAGAGCTTGAGTTGTCCAGAGATGGAAGCCAATACAGTCTTTCTGCGAACATATTACCTTCTCTCGGCGCTCGAAGCAACCGTCGAGTCATCCTTCGTCCTTTCATTATCTCCCCTTATGACCGACTTTACAGGATATGGCAGACTTTTTTGGTGATTCTTGTTGTATACACAGCATGGGTATCGCCATTTGAGTTTGGATTCCTCGAGAAACCTGTAGCACCACTTGCCATTACAGACAACGTTGTCAACGGATTCTTCGCAATCGACATAATTCTCACCTTCTTCGTTGCTTATATCGACAAAGCTACCTACTTATTCGTGGATAGCCCCAAGAGAATCGCTTGGAAATACGTAAGTTCTTGGTTTGTCTTCGATGTCATCTCCACCATCCCTTCAGAACTCGCTCGGAAAATTTCCCCTTCACCACTTAAATCATATGGATTCTTCAACATGCTTCGCCTCTGGCGTCTCCGAAGAGTCAGTGCTTTGTTTTCTAGATTGGAGAAGGACAAGAACTATAACTATTTCTGGGTTCGCTGTGCTAAGCTGATATGTGTTACGCTTTTCGCTGTTCATTGTGCTGGATGTTTCTATTATCTTCTTGCTGCTCGGTATCATGATCCCAAAAAGACGTGGCTGGGGGCAACAATGGGGGATTTTGAGGAACAGAGCTTGGGGTTGAGATATGTGACTACCATATACTGGTCTATTACAACCTTAACGACTGTCGGCTATGGAGATTTGCATCCAGTGAATTCCAGGGAGATGATCTTTGACATCTTCTATATGCTCTTCAACCTGGGATTAACGGCATATCTGATCGGTAACATGACCAATCTGGTCGTCCACTGTACGAGTCGAACCAGAAAATTTAGGGATACCATACAAGCAGCAGCAAGTTTTGCACAAAGGAATCGATTACCGGTCCGTCTACAAGATCAGATGCTGGCACATTTGTGTTTGAAGTTCAGAACAGATTCAGAGGGGTTACAGCAACAAGAGACACTTGATTCTCTTCCTAAAGCCATAAGATCAAGCATTTCTCATTATCTCTTCTATTCTCTGTTGGACAAGGTTTATTTATTTCGTGGGGTCTCTAATGACTTGCTTTTCCAACTGGTGTCAGAGATGAAAGCTGAGTATTTTCCTCCCAAAGAAGATGTCATCTTGCAAAATGAAGCTCCCACAGATTTCTACATTCTAGTGACCGGTTCTGTGGAGCTGTTGGTGATGAAAAATGGAGTAGAACAAGTTGTGGGAGAGGCAAACACTGGTGATCTCTGTGGCGAGATAGGGGTACTCTGTTACAGGCCACAGCTCTTTACGGTGCGAACCAAGCGACTGAGCCAACTTCTTAGGCTGAACCGTACGATCTTCTTGAACATCGTTCAGGCCAACGTTGGGGATGGCACCATAATCATCAACAATCTCCTCGAGCATCTCAAGGATATGAAGGACCCAATCATGGAGGGTGTGTTGGTGGAGACAGAGAACATGCTGGCTCGTGGAAGGATGGACCTCCCACTCAGCCTCTGCTTCGCTACTCTCAGAGGAGACGACTTGATGTTACATCAGTTGTTGAAACGAGGCTTGGATCCTAATGAATCCGACAACAACGCAAGAACTGCTCTCCATATAGCAGCATCTAAGGGAAGTGAGAACTGTGTCATGCTTCTGTTGGATTACGGGGCTGATCCCAACTTAAGAGATTGTGAAGGAAATGTACCACTATGGGAAGCAATACTGGGTCGACACCAATCAGTGGTGAAGTTGTTGGCAGAAAATGGAGCTTCCTTGAAATTCGGAGACGTGGGTCATTTCTCATGCACTGCAGCAGAACAGAACAACCTTAGCTTGCTCATGGACATAGTCCGATATGGAGGAGATGTCACAGTTCCTAAAACCACCACCGGGACCACTGCCCTCCACGTGGCAGTCTGTGAAGCCAACGTTGAGATTCTCAAGTTCCTGCTGGAGCGTGGGTCCGACATAGACAAACCAGACAAGGAAGGTTGGACCCCAAGAGAGCTTGCAGACCAACAAGGTCATGAAGAAATCAAAGCCATTTTTGCGTCCACTGGGTGGCCCAAAGCTCAGTCTGTTGTATCCATTCCTGAGAGGCAGAGTACGAAGATCAGGTACCTTGGGAGGTTCACTAGTGAGCCATCCATGCCTGTGGCCCCACAAGACGGGCCACTTCTGGGTACTGACAGGTCATGGGGTGATCGGAGTCGGCCGAGGAGGAGGACAGATACTTTCCATAATTCCCTGTTTGGGATTATGTCGGCTGCTCACAAGGGGGAGAACATAGAGGATTTGATGTTTGGTGTTAATAATAATAAGGTGCAGTTTACAGATAATGGAGGAGGAGGAGGAGGAGGAGGAGGTGTTTCTGCTAGAGTTACTATCACTTGTCCGGAGAAAGGTGAGGTTGGAGGGAAGCTTGTTCTGTTACCTCGGAGCTTCAAGGAGCTGATTGAGGTTGGTGTTAACAAATTTGGACTGGTTCATGATACTGTGAAGGTTTTGAGCAAAGATGGGGCTCACATTGATGATATTGAGGTTATTAGAGATGGTGATCATCTTGTTTTTGTCTCTGCTGCTGGTATCACACGTCAATCCAGCTGCCCAAAAATATAA 2694 0.4625 MRGSRNRGVFGVGVCGQEELELSRDGSQYSLSANILPSLGARSNRRVILRPFIISPYDRLYRIWQTFLVILVVYTAWVSPFEFGFLEKPVAPLAITDNVVNGFFAIDIILTFFVAYIDKATYLFVDSPKRIAWKYVSSWFVFDVISTIPSELARKISPSPLKSYGFFNMLRLWRLRRVSALFSRLEKDKNYNYFWVRCAKLICVTLFAVHCAGCFYYLLAARYHDPKKTWLGATMGDFEEQSLGLRYVTTIYWSITTLTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHCTSRTRKFRDTIQAAASFAQRNRLPVRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLLDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGSVELLVMKNGVEQVVGEANTGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTIFLNIVQANVGDGTIIINNLLEHLKDMKDPIMEGVLVETENMLARGRMDLPLSLCFATLRGDDLMLHQLLKRGLDPNESDNNARTALHIAASKGSENCVMLLLDYGADPNLRDCEGNVPLWEAILGRHQSVVKLLAENGASLKFGDVGHFSCTAAEQNNLSLLMDIVRYGGDVTVPKTTTGTTALHVAVCEANVEILKFLLERGSDIDKPDKEGWTPRELADQQGHEEIKAIFASTGWPKAQSVVSIPERQSTKIRYLGRFTSEPSMPVAPQDGPLLGTDRSWGDRSRPRRRTDTFHNSLFGIMSAAHKGENIEDLMFGVNNNKVQFTDNGGGGGGGGGVWXARVTITCPEKGEVGGKLVLLPRSFKELIEVGVNKFGLVHDTVKVLSKDGAHIDDIEVIRDGDHLVFVSAAGITRQSSCPKI 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1887 898 ProSiteProfiles cAMP/cGMP binding motif profile. 379 481 IPR000595 -
Prci4g1887 898 Pfam Ion transport protein 62 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci4g1887 898 ProSiteProfiles Ankyrin repeat profile. 655 687 IPR002110 GO:0005515
Prci4g1887 898 Gene3D Jelly Rolls 343 503 IPR014710 -
Prci4g1887 898 Pfam Ankyrin repeats (3 copies) 629 704 IPR002110 GO:0005515
Prci4g1887 898 Pfam Ankyrin repeats (3 copies) 529 618 IPR002110 GO:0005515
Prci4g1887 898 Pfam Cyclic nucleotide-binding domain 399 483 IPR000595 -
Prci4g1887 898 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1887 898 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1887 898 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1887 898 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1887 898 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1887 898 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci4g1887 898 SUPERFAMILY Ankyrin repeat 528 712 IPR036770 -
Prci4g1887 898 ProSiteProfiles Ankyrin repeat profile. 590 622 IPR002110 GO:0005515
Prci4g1887 898 ProSiteProfiles KHA domain profile. 819 898 IPR021789 -
Prci4g1887 898 PANTHER POTASSIUM CHANNEL AKT1 27 885 IPR045319 GO:0005249|GO:0006813
Prci4g1887 898 CDD CAP_ED 379 484 IPR000595 -
Prci4g1887 898 ProSiteProfiles Ankyrin repeat profile. 557 589 IPR002110 GO:0005515
Prci4g1887 898 MobiDBLite consensus disorder prediction 743 766 - -
Prci4g1887 898 Gene3D - 525 709 IPR036770 -
Prci4g1887 898 ProSiteProfiles Ankyrin repeat region circular profile. 655 687 - -
Prci4g1887 898 SMART cnmp_10 379 496 IPR000595 -
Prci4g1887 898 FunFam Potassium channel SKOR 62 300 - -
Prci4g1887 898 Pfam KHA, dimerisation domain of potassium ion channel 819 883 IPR021789 -
Prci4g1887 898 Gene3D - 63 301 - -
Prci4g1887 898 FunFam Potassium channel KAT2 367 503 - -
Prci4g1887 898 SMART ANK_2a 655 684 IPR002110 GO:0005515
Prci4g1887 898 SMART ANK_2a 557 586 IPR002110 GO:0005515
Prci4g1887 898 SMART ANK_2a 590 619 IPR002110 GO:0005515
Prci4g1887 898 SMART ANK_2a 524 553 IPR002110 GO:0005515
Prci4g1887 898 ProSiteProfiles Ankyrin repeat region circular profile. 557 588 - -
Prci4g1887 898 SUPERFAMILY Voltage-gated potassium channels 56 300 - -
Prci4g1887 898 SUPERFAMILY cAMP-binding domain-like 304 499 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1887 Prci-Chr4 25221743 25228616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1887 21 883 Ion Channels AT2G25600 62.600 0.0 1108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1887 K21867 - qsa:O6P43_023045 1379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1887 4 25221743 25228616 Prci4g1887 4 25221743 25228616 ECH