Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1860 ATGGATGGCAACAAGGACGATGCGTTAAAATGCTTGAAAATTGGGAGAGAGGCCTTAGAAAGCGGGGATCGGGTTCGCGCTTTGAAATTTGTCGCGAAAGCTCGCCGTCTTGACCCGACTTTGCCCGTTGGCGATCTGTTGGCGACGATAGAGAAAGATACAGGTGACCAACCGCCGGCGGCGGCTGCCAATGGACCATCAGTGACGTCTTCATCGAAACCCTCTGATCAACCTTCTCTTCGACAAAGGGTTTCGACAGCAGGGTCTTCATCTTCTACGTCATCAGCTACATATACGGAGGAGCAAATTACGATTGTTAGAGAGATTATGAGGAAGAAGAATTATTATGAAATTTTGGGATTGGAGAAGAGCTGTTCGGTCGAAGATGTGCGAAAAGCGTACAGGAAACTGTCTTTGAAGGTTCATCCTGATAAGAACAAAGCTCCTGGTGCTGATGAAGCGTTTAAGGTTGTGTCTAAAGCTTTCCAGTGTCTAAGTAATGAAGAGAGTCGAAAGAAGTATGATCTCGTTGGAGAGGATGAATCCATTTACGAAGGACGTGCTGCAAGGCAGACAACACGAGCATATAATGGCCATTATGAAGCTGATATCGATGCGGAGGAAATATTTAGGAATTTCTTCTTTGGTGGAATGGCTCCTGCAACACCTTTTGGTGGCTTTAGTTTTGGACCGGGGATGGGTCCCAGACCGGCTGAACATGGGTCTAGTGGCTTTAATGTTCGCGCTTTAATTCAGTTGCTTCCTGTTCTGCTTATTCTGCTTTTGAACTTCTTGCCGTCTTCAGATCCTGTCTATTCACTTTCTCGACAGTATCCATATGAACATCGGTTTACTACACCAAAGGGTGTCAACTATTATGTTAAGTCGGCCAAATTTGATCAAGACTACCCACCAGATAGCCATGAGCGAACAACACTTGAAGATAGGGTTGAGAGTGATTATCTCAATATTCTTAGAGAGAATTGTCGGCTTGAGTGGCATCGCCGCCAATGGGGATATATACGGGAAATGCCACATTGTGAAATGCTTCGCAAGTTTGAACCGGTGAACTAA 1074 0.4544 MDGNKDDALKCLKIGREALESGDRVRALKFVAKARRLDPTLPVGDLLATIEKDTGDQPPAAAANGPSVTSSSKPSDQPSLRQRVSTAGSSSSTSSATYTEEQITIVREIMRKKNYYEILGLEKSCSVEDVRKAYRKLSLKVHPDKNKAPGADEAFKVVSKAFQCLSNEESRKKYDLVGEDESIYEGRAARQTTRAYNGHYEADIDAEEIFRNFFFGGMAPATPFGGFSFGPGMGPRPAEHGSSGFNVRALIQLLPVLLILLLNFLPSSDPVYSLSRQYPYEHRFTTPKGVNYYVKSAKFDQDYPPDSHERTTLEDRVESDYLNILRENCRLEWHRRQWGYIREMPHCEMLRKFEPVN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1860 357 SUPERFAMILY Chaperone J-domain 109 228 IPR036869 -
Prci4g1860 357 MobiDBLite consensus disorder prediction 52 97 - -
Prci4g1860 357 PANTHER AT29763P-RELATED 1 352 - -
Prci4g1860 357 MobiDBLite consensus disorder prediction 63 97 - -
Prci4g1860 357 ProSitePatterns Nt-dnaJ domain signature. 155 174 IPR018253 -
Prci4g1860 357 ProSiteProfiles dnaJ domain profile. 114 178 IPR001623 -
Prci4g1860 357 FunFam Chaperone protein dnaJ 49 110 225 - -
Prci4g1860 357 PRINTS DnaJ domain signature 150 170 IPR001623 -
Prci4g1860 357 PRINTS DnaJ domain signature 116 134 IPR001623 -
Prci4g1860 357 PRINTS DnaJ domain signature 134 149 IPR001623 -
Prci4g1860 357 PRINTS DnaJ domain signature 170 189 IPR001623 -
Prci4g1860 357 Pfam Domain of unknown function (DUF1977) 266 337 IPR015399 -
Prci4g1860 357 CDD DnaJ 114 167 IPR001623 -
Prci4g1860 357 Pfam DnaJ domain 114 175 IPR001623 -
Prci4g1860 357 Gene3D DnaJ domain 110 222 IPR036869 -
Prci4g1860 357 SMART dnaj_3 113 170 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1860 Prci-Chr4 21817119 21818871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1860 109 175 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 2.85e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1860 K09518 - gmx:100793797 499.59