Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1828 ATGAGTACCGTCAACATTGAGAATCATGAAGGTGATGATGCTAATTCCTCGTTCAATCCTATGATGCTATCAGCGTATCAGATTTTCCTTGCAGTGTTAAATGCTGCTGTTGAGCTCAACTTGTTTGAGATCATTGGTAAGGGAAACCCTGAGGGCATGTCACCCTCTGAAATTGCTATCAAGCTTCCAAATCCACATGCCAGCATGGCTTGGAGGCTCGACCGAATGTTGTTTTTGCTTGCTAATTATTCTCTTCTAACATGTTCTTCCAACAAACTTTATCAATATGGTGGGATTGAGAGGCTTTATGGTCTATCTCTTGCTAGTAAATACTTAATCCCCAATAAGGATGGAGCCTCTTGTATTAGCTTATGTTGGCATCCCACTTATGTCGAAATTTGGCAAAACTTCAAACAAGTGATTCTTGATCAGGAAGAGGACTTATTCATGAAAGTTCATGGGATGTCTTATTTTGAATATATGGAAATGGATCCGACAGTCAAAACTATTTTCCATCAGGCAATGGCAGATATAGCAATTATTGAAATGAAGAAAGTACTTGAGACATACAAAGGATTTGAGGGGATGTCAACACTTGTTGTAGCTGGTGGCATTGGCCAAAGCCTCAAAATGGTCACCTTCAAGTATCCTTCAATTTAG 660 0.3955 MSTVNIENHEGDDANSSFNPMMLSAYQIFLAVLNAAVELNLFEIIGKGNPEGMSPSEIAIKLPNPHASMAWRLDRMLFLLANYSLLTCSSNKLYQYGGIERLYGLSLASKYLIPNKDGASCISLCWHPTYVEIWQNFKQVILDQEEDLFMKVHGMSYFEYMEMDPTVKTIFHQAMADIAIIEMKKVLETYKGFEGMSTLVVAGGIGQSLKMVTFKYPSI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1828 219 Gene3D Vaccinia Virus protein VP39 115 219 IPR029063 -
Prci4g1828 219 SUPERFAMILY "Winged helix" DNA-binding domain 21 117 IPR036390 -
Prci4g1828 219 FunFam Caffeic acid 3-O-methyltransferase 2 112 - -
Prci4g1828 219 PANTHER O-METHYLTRANSFERASE 23 219 IPR016461 GO:0008168
Prci4g1828 219 Gene3D - 1 112 IPR036388 -
Prci4g1828 219 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 219 IPR016461 GO:0008168
Prci4g1828 219 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 218 IPR029063 -
Prci4g1828 219 Pfam Dimerisation domain 32 81 IPR012967 GO:0046983
Prci4g1828 219 Pfam O-methyltransferase domain 134 219 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1828 Prci-Chr4 19369978 19370732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1828 13 219 Monolignol Biosynthesis Gene Families AT5G54160 44.811 1.48e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1828 K13066 - qsu:112031144 186.808