Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1796 ATGATGATCTTAGTGACAGTGATTCTGGGAGGATTGTTCGTGCTGGCGTTCCATGCTTTGGTTGCGTTGTTTCTGAAGCCAAGATTGACGAGAGAAAGCCTTCGTACGCAAGGCATCTATGGTCCTTTTCCTCACTTTTTCTTCGGGAATGTTCCAGAAATGAAATCCCTTCTTCAGGAGGTTCATGATCAGTCTCGTTCTCAACCCGAAGCATCCCCTATTTGTCATCGCTGGCCCTTCACTTTGTTCCCTCATTTGCCCAAATGGAGGAACCAATACGGGCCCATATGCTTGTATTATCGTGGAAGCAAACCGTTCTTGATGGTTCAAGATACAGAGATGGTGAAGGAGGTGAGCTTGTACACATCTTTGGATCTTGGAAAGCCTTCTTATCTATCCAAAGATCATGGGCCACTCTTCGGCCTAGGCATATTATCATCAAGTGGGCCTCTTTGGGCCCACCAAAGGAAAATAATTGCTCCTCAGCTATACCTTGATAAGGTTAAGGGGATGGTTGATTTGATGGTGGAATCAACAAATACGATGGTGAGGAAATGGGAGGCAAGAATTGATCATAATGAGAAAGCGGTTGCAGAGATAAAGATAGATGAAGATTTGAGAAGCTTATCGGCTGATATAATTGCGAAGGCCTGTTTTGGAAGCAGCTATGAAAAAGGCCAAGAAATATTCACCAAGCTTAGATTTATTCAGAAGCTCATGTCCAAATCAACTGTTGGAATTCCGGGACTACGGTACCTGCCAACAAGAAGCAACAGAGAGATATGGGCATTAGATAAAGAGATAAGCTCAATGATTAAAAGACTTGTAAACCAACGCCTCATGGTTGGTAATAAGCAGGATCTCATGCAAATGATAATGGAGGGTGCTACAAAATGTAATGAGGATGGTGGTGGTGATGACCTCTTATCAAATCCTATCTCACGTGACAAGTTCATAGTAGATAACTGCAAGAACATATATTTTGCTGGACAGGAGACGACGGCGATCACAGTGTCGTGGGCATTGATGTTGTTAGCAGAACACCAAGATTGGCAAGATCGCTGTCGAGCTGAGGTGCTTCAAGTTTGTGGAAATGGCACCTTTGATGCAACCATGCTTAGAAGCTTGAAAACGGTAACTATGGTGATTCAAGAGACTCTTAGACTTTACCCACCGGCAACATTTGTTATAAGATCAGCCTTACAAGATATTAAATTGAAACGTATTTCGATTCCGAAAGGAATGAACATTCAGATTCCAATCCCATTATTACAGCAAGACCCTGAACTGTGGGGACCTGATGCCAACATGTTCAACCCTCAAAGATTTGCAAATGGGATCATGGAAGCTTGCAAGACCCCTCAGGCTTATCTGCCATTTGGCATCGGAGCTCGGATCTGCGCTGGCCAGCATTTTGCGATGGCGGAACTGAAGGTGATCTTATCTCTGATTTTGCTCAGGTTTCAGTTCTCTCTCTCTTCAAGTTATCGCCATTCTCCTGCATTTAGACTGGTTATAGAACCTGGGGAAGGAGTCGTTCTCATGGTTAGGAGAATTTGA 1560 0.4372 MMILVTVILGGLFVLAFHALVALFLKPRLTRESLRTQGIYGPFPHFFFGNVPEMKSLLQEVHDQSRSQPEASPICHRWPFTLFPHLPKWRNQYGPICLYYRGSKPFLMVQDTEMVKEVSLYTSLDLGKPSYLSKDHGPLFGLGILSSSGPLWAHQRKIIAPQLYLDKVKGMVDLMVESTNTMVRKWEARIDHNEKAVAEIKIDEDLRSLSADIIAKACFGSSYEKGQEIFTKLRFIQKLMSKSTVGIPGLRYLPTRSNREIWALDKEISSMIKRLVNQRLMVGNKQDLMQMIMEGATKCNEDGGGDDLLSNPISRDKFIVDNCKNIYFAGQETTAITVSWALMLLAEHQDWQDRCRAEVLQVCGNGTFDATMLRSLKTVTMVIQETLRLYPPATFVIRSALQDIKLKRISIPKGMNIQIPIPLLQQDPELWGPDANMFNPQRFANGIMEACKTPQAYLPFGIGARICAGQHFAMAELKVILSLILLRFQFSLSSSYRHSPAFRLVIEPGEGVVLMVRRI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1796 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Prci4g1796 519 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 508 - -
Prci4g1796 519 Pfam Cytochrome P450 88 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 Gene3D Cytochrome P450 24 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 SUPERFAMILY Cytochrome P450 76 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g1796 519 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1796 Prci-Chr4 18425582 18432693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1796 114 516 Cytochrome P450 AT5G24900 47.330 7.54e-132 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1796 K24544 - gmx:100780335 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1334 9 26941021 26944328 Prci4g1796 4 18425582 18432693 CCT
Prci4g1796 4 18425582 18432693 Prci4g1796 4 18425582 18432693 ECH