Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1772 ATGCCATCCGAGATCGAGGTCGTTGAAGAGGTCCAATACCAGGATCAGCAACCGGCGGCTTCCGGCACTGCGTCTGGCGGTGATGAATTGGGCGAGGAGAGCTTTCGGAACGATTGCTACACCGCTGCGGCTCATGGGGATTCGGAGACTCTTCATAGATTGGTAGAGCAGGAGGGTTGCTCCGTCTCGGAGCCTGATGGGCTCGGAAACTACGCCCTCCAACGGGCGGCACTTAACAATCGTACTGCCGCTGCTCAATACATTATTGAGCATGGAGCAGATGTAAACGCAACAGATCATACTGGCCAGACTGCATTACATTGGAGTGCAGTCCATGGTGCCATCCAGGTTGCAGAGCTTTTGCTCCAAGAAGGTGCACGAGCAAGTGCTGCTGATATATATGGGTATCAGACAACACATGTTGCAGCTCAATTCGGTCAGACAGCTTTCCTCTACCACATTGTTTCAAAATGGAATGCTGACCCTGATGTTCCTGATAATAATGGAAGAAGCCCCTTGCATTGGGCTGCATACAAAGGCTTTGCTGATTGCATCTGTCTTCTGATATTCCTAGATGCATATAGGGGGCGTCAGGACAAGGAGGGTTGCACTCCTCTCCATTGGGCTGCTATCAGGGGTAATTTGGAGGCATGTACTGTGCTAATACAGGCTTGCAAGAAAGAGGACCTGATGGTTACTGATTATACTGGCCTTACACCTGCACAGCTTGCTTCTGATAAGAATCATAGACAAGTTGCTTTTTTCCTTGGTAATGCCAGAAGGTTGCTTGGTAGAGGCTGTGATGGGAATAGCCGCCTTGGAAAAGTCTCCAAATTAGGACTTGCTCCTGTACTTTGGTGTATGATTTTTGTGCTCCTGGTCACCTATATTCACTCGGTCATCTTGGCTACAAATCTGCCTAAATTAACAGCTGCCTCTGGTCTTCTAGCATGGTTTGGAGTTTTCCTTGCAACTGCTGGATTATTTATGTTTTACAGGTGTAGCAGCAAGGATCCAGGTTTCATCAGAATGAACATGCATGAGTCTGAGAATAGTAAAGATGATGAACCTCTCTTAAAGATTGAGATAAATCATCCTGCGTTGCTTGCTGGAAATTGGTCCCTTCTTTGTGCAATATGCAAGATTGTTAGGCCCCTTCGTGCAAAGCACTGTTCTACCTGTAATCATTGTGTGGAACAATTTGATCATCACTGTCCTTGGGTATCTAATTGCATCGGCAAGAGGAACAAATGGGAATTCTTTGTTTTTCTTGTTCTTGAAGTTTTAGCAATGTTGATGACTGGTGGAGTTACTCTTACAAGAATATTAACTGATCCACTTGCTCCTCCATCATTTGGATCACTGATTCAATATGCATTCACACATCTTGCGGGGGCTACATCATTTTTAGCTGTTGATTTTTTCCTCTTCTTTAATGTGTTGTTTATGACAGTTGTTCAAGCTTATCAGATATCACGCAATATTACAACAAATGAAATGGCAAATGCTGTGCGATATAGCTACCTTAGAGGTGCAGATGGTAGATTCAGAAATCCCTATGATCATGGGATCAAGAAGAATTGTACAGATTTCTTGATCAATGGATTCAATGAAGATGTGCAGTTAATTGAAGAATCAGATAAATCTGAGGGTATAGGAATGATAAACATTCCAAGGAACTCAAGCCTAGCCAACAGAGACTCACATTCTCGCGTTGAAAATGGCAACGGCCATGTTGTCATTAATGTCGGTTCCAGCGGCACCAGCTCTAATTCGCTCCATGCTTGTGCTCTTCACAGTCATGGCAATGGTCATGCTCATTCCTCTCGTTGTTGCCACAATAATGCCCATGGCAAAACAAAAAATGAGAGTGTTCCTCTGGGTTTAGGACTTGGTCTTGGTCGGAACACCAGATCTGGTGCATCCTCGTCATGA 1935 0.4481 MPSEIEVVEEVQYQDQQPAASGTASGGDELGEESFRNDCYTAAAHGDSETLHRLVEQEGCSVSEPDGLGNYALQRAALNNRTAAAQYIIEHGADVNATDHTGQTALHWSAVHGAIQVAELLLQEGARASAADIYGYQTTHVAAQFGQTAFLYHIVSKWNADPDVPDNNGRSPLHWAAYKGFADCICLLIFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLIQACKKEDLMVTDYTGLTPAQLASDKNHRQVAFFLGNARRLLGRGCDGNSRLGKVSKLGLAPVLWCMIFVLLVTYIHSVILATNLPKLTAASGLLAWFGVFLATAGLFMFYRCSSKDPGFIRMNMHESENSKDDEPLLKIEINHPALLAGNWSLLCAICKIVRPLRAKHCSTCNHCVEQFDHHCPWVSNCIGKRNKWEFFVFLVLEVLAMLMTGGVTLTRILTDPLAPPSFGSLIQYAFTHLAGATSFLAVDFFLFFNVLFMTVVQAYQISRNITTNEMANAVRYSYLRGADGRFRNPYDHGIKKNCTDFLINGFNEDVQLIEESDKSEGIGMINIPRNSSLANRDSHSRVENGNGHVVINVGSSGTSSNSLHACALHSHGNGHAHSSRCCHNNAHGKTKNESVPLGLGLGLGRNTRSGASSS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1772 644 SUPERFAMILY Ankyrin repeat 40 257 IPR036770 -
Prci4g1772 644 ProSiteProfiles Ankyrin repeat region circular profile. 101 132 - -
Prci4g1772 644 Gene3D - 155 262 IPR036770 -
Prci4g1772 644 ProSiteProfiles Ankyrin repeat profile. 168 200 IPR002110 GO:0005515
Prci4g1772 644 Gene3D - 27 154 IPR036770 -
Prci4g1772 644 MobiDBLite consensus disorder prediction 623 644 - -
Prci4g1772 644 ProSiteProfiles Ankyrin repeat profile. 201 223 IPR002110 GO:0005515
Prci4g1772 644 ProSiteProfiles Ankyrin repeat region circular profile. 201 223 - -
Prci4g1772 644 ProSiteProfiles Ankyrin repeat profile. 68 100 IPR002110 GO:0005515
Prci4g1772 644 ProSiteProfiles Ankyrin repeat region circular profile. 68 99 - -
Prci4g1772 644 ProSiteProfiles DHHC domain profile. 375 425 - -
Prci4g1772 644 FunFam S-acyltransferase 25 154 - -
Prci4g1772 644 Pfam DHHC palmitoyltransferase 376 502 IPR001594 GO:0016409
Prci4g1772 644 MobiDBLite consensus disorder prediction 10 33 - -
Prci4g1772 644 Pfam Ankyrin repeats (3 copies) 42 129 IPR002110 GO:0005515
Prci4g1772 644 Pfam Ankyrin repeats (3 copies) 199 256 IPR002110 GO:0005515
Prci4g1772 644 ProSiteProfiles Ankyrin repeat profile. 101 133 IPR002110 GO:0005515
Prci4g1772 644 SMART ANK_2a 168 200 IPR002110 GO:0005515
Prci4g1772 644 SMART ANK_2a 101 130 IPR002110 GO:0005515
Prci4g1772 644 SMART ANK_2a 201 232 IPR002110 GO:0005515
Prci4g1772 644 SMART ANK_2a 68 97 IPR002110 GO:0005515
Prci4g1772 644 SMART ANK_2a 34 64 IPR002110 GO:0005515
Prci4g1772 644 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 32 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1772 Prci-Chr4 17843587 17868161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1772 39 221 Ion Channels AT2G25600 32.609 2.77e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1772 K20032 - gmx:100777470 1008.82